Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2776 |
Symbol | |
ID | 7970989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2923495 |
End bp | 2924493 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644793363 |
Product | hypothetical protein |
Protein accession | YP_002944664 |
Protein GI | 239815754 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.918758 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGAACA CCTACAACGC TTCGCGCCGC CGCTTGCTGG CGCTGGCAAT AGCCACTACC AGTGCGCTCG CCATCGCAGC AACGCCGGCG CACGCTCAGC AGGACTACCC GAACAAGCCG ATTCGCCTCA TCGTGCCTTT CACACCCGGT GGCGTGACGG ACACCGGCGC GCGCGTCGTG GCCGAGCGCC TCGGGGCCCG GCTGGGCCAG CAGGTGGTGG TCGACAACCG GCCCGGCGCG TCCGGCAACA TCGGCACACA GATGGTCGCG GCCGCGCCGC CCGACGGCTA CACGCTGGTG CTGGGCTTCG ACGGTACGCT GGTCATCAAC CCGCACGTGT TCGCGAAGGT CCCGTTCGAC ACAGTGAAAG ACTTCGTGCC CGTCAGCAAG ATCGGCGATG CGGTGCTCGT CATCGTCACG CACCCCTCGG TGCCCGCGAA GACCTTGCCC GAGCTGATCG CATATTCGAA GAGCAACCCG GGCGGCTTGT CCTACGGCAG CTCTGGCACG GGTGGCACGC CCCACGTCGC CGCTGAAATG CTCAAGGTGA AGACCGGCGC CAACTTCGTC CATGTGCCCT ACAAGGGCGG CGGCCAGGCC ATGACCGACG TGGTCGGCGG CCAGCTGCCG ATGCTCTACA CCGCCGTGGC CGGCGCGCTG CCCTTCATCG AGAGAGGACA GGTGCGCGCC ATCGCGATTT CGAGCGCGCA GCGGCTGCCA TCGCTTCCCG ACGTGCCCAC CGTCGGCGAA ACCGTGTCGG GCTTCGAAGC GAGTTCCTGG ATCGGCATCC TCGCGCCCGC CAAGACCCCC ACGCCCATCA TCGACCGCAT TCAGCGCGAG TTGCATGCCG TGGTGAACGA GCCCGCGGTC AAGGAGCGCC TCGCCAAGCT CGGCATCACG TCGGTGGGCA ATACGTCGGC GGAGTTCGGG CAACAGATCC AGGCGGATTT GAAGAAGTAC GCGGATGTAG TGAAGGCGGC CGGGATCAAG ATTGATTGA
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Protein sequence | MTNTYNASRR RLLALAIATT SALAIAATPA HAQQDYPNKP IRLIVPFTPG GVTDTGARVV AERLGARLGQ QVVVDNRPGA SGNIGTQMVA AAPPDGYTLV LGFDGTLVIN PHVFAKVPFD TVKDFVPVSK IGDAVLVIVT HPSVPAKTLP ELIAYSKSNP GGLSYGSSGT GGTPHVAAEM LKVKTGANFV HVPYKGGGQA MTDVVGGQLP MLYTAVAGAL PFIERGQVRA IAISSAQRLP SLPDVPTVGE TVSGFEASSW IGILAPAKTP TPIIDRIQRE LHAVVNEPAV KERLAKLGIT SVGNTSAEFG QQIQADLKKY ADVVKAAGIK ID
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