| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2775 |
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| Symbol | |
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| ID | 7970988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2922597 |
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| End bp | 2923460 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644793362 |
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| Product | 2,3-dimethylmalate lyase |
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| Protein accession | YP_002944663 |
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| Protein GI | 239815753 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAATC CCATCCTCCG GCAGAAGCTC GACCGCGGTG AATTCATCGT CGCGCCCGGC
CTGCACGACA TGATTGCCGC CACCGTGGCG AACAAGGTCG GCTTCGACAT CGTCTACGGC
ACGGGCTACT GGCTCACCGC CTCCAGCCTG GGCCTGCCCG ACGCGGGCAT CGCCACCTAC
ACGCAGATGC TCGACCGCAT GGCGACGCTG GTGCGCACGA GCAAGGGGGC AGTCATCGCC
GATGCCGACA CCGGCTACGG CGGGCTGCTG AACGTGCACC ACACGGTGCG CGGCTACGAG
GCAGCGGGCG TCACGGCCAT CCAGCTCGAA GACCAGGAGT TTCCGAAGAA GTGCGGCCAC
ACGCCCAACA AGCGCTGCGT GCCCATGCAG GACATGGTCG AGAAGATCAA GGTGGCCGCC
GAGGCGCGCG AGGACAAGGA CAACTTCCTC ATCATCGCCC GCACCGATAC GCGCGCATCG
CTCGGCGTCG ACGAGGCGAT GCGCCGCCTG GAGGCGTATG CCGAGGCCGG TGCCGACATC
CTGTTCTTCG AGGCACCGCA GTCCGAAGAA GAGATGCGCA AGGCCTGCGC TGCATTCGAC
ACGCCGATGC TGGCCAACAT GGCCGATGGC GGCACGACGC CGATCCTGCC CGTGAAGGTA
TTGGAGGAGA TCGGCTTTGC GCTGGCCATC TACCCCTCGC TCACCAGCCT GTCGGCCGCA
GCCGCGATGG AGCGCGCGTT GAGCCACCTC AAGGACAGCG GCGTCAGCCA GGCGCCCGAG
GTGCCGCTGT TCGACTTCAA CGAGTTCTGC GGTCTCATCG GCTTTCAGGA AGTGTGGGAT
TTCGACAAGC GCTGGGCGCG CTGA
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| Protein sequence | MANPILRQKL DRGEFIVAPG LHDMIAATVA NKVGFDIVYG TGYWLTASSL GLPDAGIATY
TQMLDRMATL VRTSKGAVIA DADTGYGGLL NVHHTVRGYE AAGVTAIQLE DQEFPKKCGH
TPNKRCVPMQ DMVEKIKVAA EAREDKDNFL IIARTDTRAS LGVDEAMRRL EAYAEAGADI
LFFEAPQSEE EMRKACAAFD TPMLANMADG GTTPILPVKV LEEIGFALAI YPSLTSLSAA
AAMERALSHL KDSGVSQAPE VPLFDFNEFC GLIGFQEVWD FDKRWAR
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