Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2751 |
Symbol | |
ID | 7972678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2901659 |
End bp | 2903494 |
Gene Length | 1836 bp |
Protein Length | 611 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644793338 |
Product | GTP-binding protein TypA |
Protein accession | YP_002944639 |
Protein GI | 239815729 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTACCA AGCAAATCCG CAATATCGCC ATCATTGCCC ACGTCGACCA TGGCAAGACC ACGATGGTCG ACCAGCTGCT GCGGCAGTCG GGCACCTTTG CCGAGCACGA GAAAGTGGTC GACACGGTGA TGGACAACAA CGCCATCGAA AAGGAACGTG GCATCACGAT CCTGGCCAAG AACTGCGCCG TGACCTGGGA AGGCACGCAC ATCAACATCG TCGACACCCC CGGCCACGCG GACTTCGGCG GCGAAGTGGA GCGCGCGCTG TCGATGGTCG ATGGCGTGGT GCTGCTGATC GACGCACAGG AAGGCCCGAT GCCGCAGACG CGCTTCGTGA CCAAGAAGGC GCTGGCCCTG GGCCTGAAGC CGATCCTGGT CGTGAACAAG GTCGACAAGC CGGGCGCCAA CCCCGACAAG GTGGTGAACG CCGCCTTCGA CCTGTTCGAC AAGCTCGGCG CCACCGACGA ACAGCTCGAC TTCCCTGTGG TGTACGCCTC GGGCATCAAC GGCTGGTCGT CGCTCGAAGA GGGTGCGCCC GGCGAGCAGT GGGGCCCCGA CATGTCGGCG CTGTTCAACA CCATCCTGAA GCATGTGCCG GCGCAGAAGG GCGATCCGGA CGCACCGCTG CAGCTGCAGA TCTCGGCGCT CGACTTCTCG ACCTTCGTCG GCCGCATCGG CGTGGGCCGC ATCAGCCAGG GCACGCTCAA GCCCATGATG GACGTGCTGG TGATGGAAGG TCCGGACGGC AAGACCGTCA AGGGCCGCGT CAACCAGGTG CTGACCTTCC AGGGCCTGGA CCGCGTGCAG GCCACCGAAG CCGGCCCGGG CGAGATCGTG CTGATCAACG GCATTGCCGA CATCGGCATC GGCGTGACCG TGACCGATCC GGCCAACCCG TCGCCGCTGC CCATGCTCAA GGTCGACGAA CCGACCCTGA CCATGAACTT CTGCGTCAAC ACCAGCCCGC TGGCCGGCCG CGAAGGCAAG TTCGTCACCA GCCGCCAGAT CTGGGACCGC CTGCAGAAGG AACTGCAGCA CAACGTGGCG CTGCGCGTGA ACGAAACCGA CGAGGAAGGC ATCTTCGAGG TGATGGGCCG CGGCGAACTG CACCTGACCA TCCTGTTGGA AAACATGCGC CGCGAAGGCT ATGAAATGGC CGTGTCCAAG CCGCGCGTGG TGTTCCGCAC CGTCAACGGC GAGAAGCACG AGCCGATCGA GCTGGTGACC GCCGACATCG AAGAGCAGCA CCAGGGCGGC GTGATGCAGG CCCTGGGCGA GCGCAAGGGC GAGCTGGTCA ACATGGAACC GGACGGCCGC GGCCGCGTGC GCCTGGAGTA CCGCATTCCG GCGCGTGGCC TGATCGGCTT CACCAACGAA TTCCTGAACC TGACGCGCGG CTCGGGCCTC ATCAGCAACA TCTTCGACAG CTACGAGCCG CACAAGGGCG AGATCGGCAG CCGCAAGAAC GGCGTGCTGA TTTCCATGGA CGACGGTGAA ATCTTCACCT ACGCCCTGGG CAAGCTGGAC GACCGCGGCC GCATGTTCGT GAAGGCGAAC GATCCGGTGT ACGAAGGCAT GATCGTGGGC ATCCACAGCC GCGACAACGA CCTGGTGGTG AACGCCACGC GCACCAAGCA GCTGACCAAC TTCCGTGTCT CGGGCAAGGA AGACGCGATC AAGATCACGC CGCCGATCGA ACTCACGCTG GAATACGGCG TGGAATTCAT CGAGGACGAC GAGCTGGTCG AGATCACGCC CAAGAGCGTG CGCCTGCGCA AGCGTTTCCT CAAGGAAAAC GAGCGCAAGC GCGCCAGCCG CGAAATGGCG AGCTGA
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Protein sequence | MSTKQIRNIA IIAHVDHGKT TMVDQLLRQS GTFAEHEKVV DTVMDNNAIE KERGITILAK NCAVTWEGTH INIVDTPGHA DFGGEVERAL SMVDGVVLLI DAQEGPMPQT RFVTKKALAL GLKPILVVNK VDKPGANPDK VVNAAFDLFD KLGATDEQLD FPVVYASGIN GWSSLEEGAP GEQWGPDMSA LFNTILKHVP AQKGDPDAPL QLQISALDFS TFVGRIGVGR ISQGTLKPMM DVLVMEGPDG KTVKGRVNQV LTFQGLDRVQ ATEAGPGEIV LINGIADIGI GVTVTDPANP SPLPMLKVDE PTLTMNFCVN TSPLAGREGK FVTSRQIWDR LQKELQHNVA LRVNETDEEG IFEVMGRGEL HLTILLENMR REGYEMAVSK PRVVFRTVNG EKHEPIELVT ADIEEQHQGG VMQALGERKG ELVNMEPDGR GRVRLEYRIP ARGLIGFTNE FLNLTRGSGL ISNIFDSYEP HKGEIGSRKN GVLISMDDGE IFTYALGKLD DRGRMFVKAN DPVYEGMIVG IHSRDNDLVV NATRTKQLTN FRVSGKEDAI KITPPIELTL EYGVEFIEDD ELVEITPKSV RLRKRFLKEN ERKRASREMA S
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