Gene Vapar_2746 details

Gene Information

• Locus tag: Vapar_2746
• ID: 7972347
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 2895188
• End bp: 2895826
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 644793333
• Product: hypothetical protein
• Protein accession: YP_002944634
• Protein GI: 239815724
• COG category: [S] Function unknown
• COG ID: [COG0779] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCATTGC AGCAGACAGT GGAACAAACC GTTGCCGGTC TCGGCTACGA CCTGGTCGAG 
ATCGAACGCT CGGCCGGGGG ATTGCTGCGC GTGACAATTG ATTTGCCCTG GACTGCCCCC 
ACATCGGAAG CTGTGGCTGC AGGCATTCCC GAACCCTTCG TGACGGTCGA GGATTGCGAG 
AAGGTCACGC GCCAGTTGCA GTTTGCGCTC GAGGTCGACG GTGTCGATTA CAAGCGGCTC 
GAGGTTTCCT CGCCGGGTAT TGACCGTCCG CTTCGCAATG AGCAGGATTT CGAGCGTTTC 
GTGGGCGAGG TGATCGACAT CACGCTCAAG GCGCCCATGG GTGCCGCGGC GGCGGGGCAG 
GTGTCTGCCA CCCGCAAGAA GTTTCGCGGC ACGCTGGAGC GCGTGGCGGG GGCCGACGGG 
GCCCCGGGCT GGCAAATCGT CTGGAGCGAT GCGCCGGAGC CCAAACCGGG TCAAAAAGTC 
AGCAAGAAGC GCGCGCCTGC AAAGTTGCAT GCGCTGGGTT TCGTGCTGGA TGAGCTGCGC 
GATGCGCGGC TCGCGCCAAT TGTGGATTTC AAGGGCCGCA AGGCCAAAAC CCAACCGGGT 
TTTTCGGATA TTGACGACGG AACCAACGTT CCGGACTGA 

 

Protein sequence

MALQQTVEQT VAGLGYDLVE IERSAGGLLR VTIDLPWTAP TSEAVAAGIP EPFVTVEDCE 
KVTRQLQFAL EVDGVDYKRL EVSSPGIDRP LRNEQDFERF VGEVIDITLK APMGAAAAGQ 
VSATRKKFRG TLERVAGADG APGWQIVWSD APEPKPGQKV SKKRAPAKLH ALGFVLDELR 
DARLAPIVDF KGRKAKTQPG FSDIDDGTNV PD