| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2739 |
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| Symbol | |
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| ID | 7972340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2886566 |
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| End bp | 2887417 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644793326 |
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| Product | DNA ligase |
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| Protein accession | YP_002944627 |
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| Protein GI | 239815717 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTGAACA GACGTTCCCT CCTGCTCGCC GGCCTCGGCG CGCTGGCGGC CCGCGGGGCC
GCCGCGCGCG AGGCCGCGCC GGCCTTGATG CTGGCCGAGG TCTACCGCCC CGGCATGTCG
CTGGACGACT ACTGGGTCAG CGAAAAATTC GACGGCGTGC GCGGCTACTG GGACGGCAAG
CAGCTGTGGA CGCGCGGCGG CGAACCGGTG GTGGCGCCCG CCTGGTTCAT CGCGCCGTTG
CCCAAGCAGC CGCTCGACGG CGAGCTGTGG GCCGGCAGGG GCCAGTTCGC GCATGCGGTT
TCCACCGTGC GCAGCCAGAC GCCCAACGAC ACCGCCTGGC ACAGCATGCG CTTCATGGTG
TTCGACCTCC CGGCCCAGGG CGGCGATTTC ACGGCGCGGC TGGCCGTCTT GCGCAAGCTG
CTGCCGATCA CCGATGCGCC GTGGGTGGTG CCCGTGCCGC AGGAGCGCGC AACCACCCAT
GCGGATCTGC AGGCCCTGCT CGCCAAGACC GTGAAGATGG GCGGCGAGGG CCTGATGCTG
CACCGGGGCG GATCGCTCTA CCGCGCCGAG CGCAACAGCG ACCTGCTCAA GGTCAAGACC
CACGACGACG CCGAGGCCCG CGTGGTCGGC CACATGCCCG GCAAGGGCCG GCACAGCGGC
CGGTTGGGCG CGCTGCTGGT CGAAACTCCC GAGGGCAAGC GCTTCAAGCT CGGCAGCGGC
CTGACCGATG CCGAGCGCGA GAACCCGCCC GCCATCGGCA GCTGGGTGAC CTACCGCTAC
AACGGCACCA ACCCGGGCGG CTTGCCCAGG TTCGCGCGCT TCATGCGGGT GCGCAGCGAC
CGGCCCTCCT GA
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| Protein sequence | MLNRRSLLLA GLGALAARGA AAREAAPALM LAEVYRPGMS LDDYWVSEKF DGVRGYWDGK
QLWTRGGEPV VAPAWFIAPL PKQPLDGELW AGRGQFAHAV STVRSQTPND TAWHSMRFMV
FDLPAQGGDF TARLAVLRKL LPITDAPWVV PVPQERATTH ADLQALLAKT VKMGGEGLML
HRGGSLYRAE RNSDLLKVKT HDDAEARVVG HMPGKGRHSG RLGALLVETP EGKRFKLGSG
LTDAERENPP AIGSWVTYRY NGTNPGGLPR FARFMRVRSD RPS
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