Gene Vapar_2731 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2731 
Symbol 
ID7972331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp2879318 
End bp2879761 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content69% 
IMG OID644793317 
ProductDNA polymerase III subunit chi 
Protein accessionYP_002944619 
Protein GI239815709 
COG category[L] Replication, recombination and repair 
COG ID[COG2927] DNA polymerase III, chi subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.480255 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGGAAA TCGGCTTTCA TTTCAATCTG CCGGACAAGG CGAACTACGC CTGCCGGCTG 
GTGCGCAAGG CCGTGAGCGT GCGCGGCTTG CGGGTGGTCG TGGTGGGCGA GCCGCAGATG
CTGGAGGCGG TCGATGCGGC GCTCTGGCAG CTCTCGCCCT GCGACTTCAT CGCGCATTGC
CGCGGCGATG CGCAGCCCCA CCTGGTGGCG CGCTCGCCGG TCATTCTTTG CGCCGAGGGC
GCGGACGCCG CGGGGCTCGC GCACCGCGAG ATGCTGGTCA ATCTCGGGCC CACGGTGCCC
GTCGGCTTCG AGCGCTTCGA GCGCCTGGTC GACATCGTGA GCAACGAGAC CGACGATCGG
CAGATCGGCC GCTCGCGCTG GCGCCACTAT GCCGACCGGG GCTATTCGAT CCAGCCGCAC
GACTTTGCAA GGAGCGCCTC CTGA
 
Protein sequence
MTEIGFHFNL PDKANYACRL VRKAVSVRGL RVVVVGEPQM LEAVDAALWQ LSPCDFIAHC 
RGDAQPHLVA RSPVILCAEG ADAAGLAHRE MLVNLGPTVP VGFERFERLV DIVSNETDDR
QIGRSRWRHY ADRGYSIQPH DFARSAS