| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2728 |
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| Symbol | |
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| ID | 7972328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2875519 |
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| End bp | 2876628 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644793314 |
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| Product | permease YjgP/YjgQ family protein |
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| Protein accession | YP_002944616 |
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| Protein GI | 239815706 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0795] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.437446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAACAA TCCGACGCCT GATCTATGTC GAGGCACTGA AGGCCGTGGC TTTCGTGACC
CTCGGCTTCC TGAGCCTGTT CTTCTTCTTC GACTTCGTCG ACGAGCTGCA GTCGATCGGC
CGGCCCGAAA GCCTTGCCTA CGGCCCTGCG CAGGCACTGA TCTACGTGAC CCTGCTGATT
CCGAGCCACC TTTACGAACT GCTTCCGATC ACGGTGCTGA TCGGCTGCAT CTTCGTGATG
GCGCGCCTTG CGCAAAGCTC GGAATACACC ATTCTTCGCA CCAGCGGCCT GGGGCCGTGG
CGCGCGCTGC GCACCCTGCT GCTGCTGGGC GTGGGCTTCG TCTTCCTGAC CTTTGCCATC
GGCGACTACA TCGCACCGGC GTCCGAGCGC ACCGGCCAGC TGCTCAAGTC GCGCTACCAG
GGCTCCTACT CGCTGGTCGG CAACACGGGC GCATGGCTCA AGGAAAAGCG CGAGAACGTG
TCCTATGCCG TCAACGTGCT GTCCATCGCG CGCGACGGTT CGCTCAAGAA TGCGCGCATC
TTCGAGTTCG ACGCCAACGG CTATGTGCGC AAGCAGCTCG TCGCGTCCTC GGCACGCATC
TTCGACGACC ACTGGCAGCT GTCGGACGTC GAACTGCAGG ACTACGAAAC GCGCATCTCG
GCAGAAAAGG CCCGCATCGT GACCACCAAG GTGCCGCAGC TCGACTGGCC GACCACGCTG
ACCAGCGAAA TGGTGTCGGT GGCGCTGCTG CGGCCCGACC GAATGGGCAC GCTGGACCTG
TTCGACTACA TCCGGCACCT GGAGGCCAAC GGCCAGACCG CGCAGCGCTA CGAGATCCAG
TTCTGGCGCA AGGTCTTCTA CCCGCTCTCA TGCCTGGTGA TGGTGGTGCT CGCCCTGCCC
TTCGCCTACC TGCACTTCCG CCAGGCCGGC ATCACCACCT ACGTGTTCGG CGGCGTGATG
ATCGGCATCA GCTTCTTCCT GCTGAACAAC GTCTTCGGCT ATCTCGGCAA CCTGAGCAAC
TGGTCGCCAT GGCTGACGGC GGCGGCGCCC GGGCTCATCT ATTCGGTGAT GTCGCTGGCT
GCCTTCAGCT GGCTGGTGCT TCGAAGGTAG
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| Protein sequence | MKTIRRLIYV EALKAVAFVT LGFLSLFFFF DFVDELQSIG RPESLAYGPA QALIYVTLLI
PSHLYELLPI TVLIGCIFVM ARLAQSSEYT ILRTSGLGPW RALRTLLLLG VGFVFLTFAI
GDYIAPASER TGQLLKSRYQ GSYSLVGNTG AWLKEKRENV SYAVNVLSIA RDGSLKNARI
FEFDANGYVR KQLVASSARI FDDHWQLSDV ELQDYETRIS AEKARIVTTK VPQLDWPTTL
TSEMVSVALL RPDRMGTLDL FDYIRHLEAN GQTAQRYEIQ FWRKVFYPLS CLVMVVLALP
FAYLHFRQAG ITTYVFGGVM IGISFFLLNN VFGYLGNLSN WSPWLTAAAP GLIYSVMSLA
AFSWLVLRR
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