| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2725 |
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| Symbol | |
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| ID | 7972325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2872919 |
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| End bp | 2874094 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644793311 |
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| Product | putative aminotransferase |
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| Protein accession | YP_002944613 |
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| Protein GI | 239815703 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.111664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCCC TTTCCTCCTC CCCCCGCACC CCGGAGATCG CCACCAAGCT GCCCGCCGTG
GGCACCACCA TCTTCACCGT GATGTCCGCG CTCGCGGCAG AGAAGAACGC GGTGAACCTC
GGCCAGGGCT TCCCCGATTT CAACTGCGAC CCGAAGCTGC TCGAAGACGT CACGGCCGCC
ATGGCCGCGG GCCACAACCA GTACCCGCCG ATGCCCGGCA TACCGGCATT GCGCGAGGCC
ATCGCGCGCA AGATCTCGGC GCTCTACGGC CACGACTACA GCGCCGCCGA CGAGATCACC
GTCACCGCCG GCGCCACGCA GGCGATCATC ACCGCCATCC TTGCGGTGGT GCGCTCGGGC
GACGAGGTGA TCGTCCTGGA GCCCTGCTAC GACAGCTACG TGCCCAACAT CGAGCTGGCC
GGCGGCCGCG TGGTGCGCGT GCCGCTGGTG CCCGGCACCT TCCGCCCCGA CTTCGACAAG
ATCGCCGCGG CGATCACGCC GCGTACGCGG GCGATCATCG TCAACACGCC GCACAACCCG
AGCGCCACGG TCTGGACCGC CGCCGAGATG CGCAAGCTCG AGGAACTGCT GGCACCGACC
GACGTCCTCG TGATTGCCGA CGAGGTCTAC GAGCACATGG TCTACGACGG TGCGCAGCAT
GAAAGCGTGG CGCGCTTCCC GGGCCTGGCG GCGCGCAGCT TCATCGTGAG CAGCTTCGGC
AAGACCTACC ACGTCACCGG GTGGAAGGTC GGCTTCGTGG CCGCGCCCGC GCCGCTGATG
GCCGAGTTCC GCAAGGTGCA CCAGTTCAAC GTGTTCACCG TCAACACGCC GATGCAGCAT
GCGCTCGCGC AGTACATGGC CGAGCCCGGG CCCTACCTCG AGCTGCCCGC CTTCTACCAG
CGCAAGCGCG ACCTGTTCGC GGCCGGCCTG GCCCAGAAGA CCCGCTTCAG GCTGCTGCGC
AGCGAGGGCA GCTATTTCCA GTGCGTCGAC ATCTCGGCGG TGAGCGACCT GTCCGAAGCC
GAGTTCTGCC TGTGGCTCAC GCGCGAGATC GGCGTGGCGG CGATTCCGCT GTCGGCCTTC
TACGGCAACG GCTTCGACCA GCGCGTGGTC CGCTTCTGCT TCGCCAAGAA GGACGAGACG
CTGCTCGCGG CCATGGATCG GCTCGCACGG CTTTGA
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| Protein sequence | MSALSSSPRT PEIATKLPAV GTTIFTVMSA LAAEKNAVNL GQGFPDFNCD PKLLEDVTAA
MAAGHNQYPP MPGIPALREA IARKISALYG HDYSAADEIT VTAGATQAII TAILAVVRSG
DEVIVLEPCY DSYVPNIELA GGRVVRVPLV PGTFRPDFDK IAAAITPRTR AIIVNTPHNP
SATVWTAAEM RKLEELLAPT DVLVIADEVY EHMVYDGAQH ESVARFPGLA ARSFIVSSFG
KTYHVTGWKV GFVAAPAPLM AEFRKVHQFN VFTVNTPMQH ALAQYMAEPG PYLELPAFYQ
RKRDLFAAGL AQKTRFRLLR SEGSYFQCVD ISAVSDLSEA EFCLWLTREI GVAAIPLSAF
YGNGFDQRVV RFCFAKKDET LLAAMDRLAR L
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