Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2693 |
Symbol | |
ID | 7972292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2836823 |
End bp | 2837341 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644793281 |
Product | peptidoglycan-associated lipoprotein |
Protein accession | YP_002944584 |
Protein GI | 239815674 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.671246 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGAAAC GTACGATTTA TTCGCTGGCC ATCGTGGCTC TGATTGCCGG CTGCTCGTCG GGCACCAAGC TCAACGACAC CCCGGTGACC GACCGCTCCG GCACCGCCGG CGGCCAGCAG GGCAGCGCGA GCGCCGTGGC GCCCGTCACC ATCGATCCCA ATGCCGGTAC CGCTCAAGGG CCGGTCGGTA TCGAACGGAT CGTCTATTTC GACTACGACA GCTATACGGT CAAGCCCGAG TTCCAGTCCC TGATCGACGG CCACGCCCGT TTCCTCAAGG CCAACCCGCA GCGCCGCGTT TCCATCGAAG GCCACACCGA CGACCGTGGC GGCCGCGAGT ACAACCTTGC ACTCGGCCAG AAGCGCTCCG AGGCCGTCCG CCGCGCGCTG ACGCTCTTGG GCGTGAGCGA CGCCCAGATC GAAGCCGTGA GCTTCGGCAA GGAAAAGCCC GCGGTCCAGG GCTCGGGCGA AGAAGCCTGG GCACAGAACC GCCGCGCTGA AATCCGCTAC ACCCGGTGA
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Protein sequence | MLKRTIYSLA IVALIAGCSS GTKLNDTPVT DRSGTAGGQQ GSASAVAPVT IDPNAGTAQG PVGIERIVYF DYDSYTVKPE FQSLIDGHAR FLKANPQRRV SIEGHTDDRG GREYNLALGQ KRSEAVRRAL TLLGVSDAQI EAVSFGKEKP AVQGSGEEAW AQNRRAEIRY TR
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