| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2685 |
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| Symbol | |
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| ID | 7972284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2828720 |
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| End bp | 2829637 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644793273 |
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| Product | Coproporphyrinogen oxidase |
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| Protein accession | YP_002944576 |
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| Protein GI | 239815666 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0408] Coproporphyrinogen III oxidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0507108 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACAGA CCAACCCGGC AGCGGTCGGC GACTACCTGC GCAAGCTGCA GCAGGAGATC
GTCGCGGCCG TCGAGGCGGC CGATGGCGGT ACCTGCGTGC GCGATGCCTG GCAAAAGGAG
CCTGGCGAGG CGCTGCAGGG CAGCGGCCTC ACCTGCATTC TGGAAGGCGG CGCGCTGTTC
GAGCGCGCGG GCTGCGGCTT CTCGCAGGTG CGCGGCCCCA GGCTGCCGCC TTCGGCCACG
CAGAACCGGC CCGAGCTCGC CGGCGCGCCC TTCGAGGCCA TGGGCGTTTC GCTGGTGTTC
CATCCGCGCA ATCCCTACGT GCCCATCGTC CACATGAACG TGCGCATGCT GGCCGCGCTG
CCCGAGGGCA AGGACCCGGT GTGCTGGTTC GGCGGCGGCA TGGACCTCAC GCCCTGCTAT
GGCTTCGAGG ATGACGCGGT TCACTTCCAC ACCGTGTGCC GCGATGCGCT GGCCCCTTTC
GGCGACGACA AGTACCCGCG CTTCAAGACC TGGTGCGACG AGTATTTCTT CCTCAAGCAC
CGCAACGAGC AGCGCGGCAT CGGCGGCATC TTCTTCGACG ACTTCGCCGA GGGCGGATTC
GACAACGGCT TTGCCTTGCT GCGCTCGGTG GGCAATGCCT TCCTGCCGGC CTACCTGCCC
ATCATCGAGC GGCGCCGCGC CATGCCCTGG GGCGAGCGCG AGCGGGCGTT CCAGCTGTAC
CGGCGCGGGC GCTACGTGGA GTTCAACCTC GTGTGGGACC GCGGCACGCA CTTCGGGCTG
CAGTCGGGCG GGCGCACCGA ATCGATCCTG CTGTCGATGC CGCCGCTGGC CAGCTGGGCC
TACCAGCAGC AGCCGGAGCC GGGCAGCCCC GAAGCCGCGC TGTACAGCGA CTTCATCGTG
CGGCGCGACT GGTTGTGA
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| Protein sequence | MQQTNPAAVG DYLRKLQQEI VAAVEAADGG TCVRDAWQKE PGEALQGSGL TCILEGGALF
ERAGCGFSQV RGPRLPPSAT QNRPELAGAP FEAMGVSLVF HPRNPYVPIV HMNVRMLAAL
PEGKDPVCWF GGGMDLTPCY GFEDDAVHFH TVCRDALAPF GDDKYPRFKT WCDEYFFLKH
RNEQRGIGGI FFDDFAEGGF DNGFALLRSV GNAFLPAYLP IIERRRAMPW GERERAFQLY
RRGRYVEFNL VWDRGTHFGL QSGGRTESIL LSMPPLASWA YQQQPEPGSP EAALYSDFIV
RRDWL
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