| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2684 |
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| Symbol | |
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| ID | 7972283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2827422 |
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| End bp | 2828720 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644793272 |
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| Product | phosphoribosylamine/glycine ligase |
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| Protein accession | YP_002944575 |
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| Protein GI | 239815665 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0151] Phosphoribosylamine-glycine ligase |
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| TIGRFAM ID | [TIGR00877] phosphoribosylamine--glycine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0337126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGTAC TGGTAATTGG AGGAGGGGGC CGGGAGCACG CACTGGCGTG GCGGCTGGCG
CAGGCCAGCC GGGTCAGCCG CGTGTACGTG GCGCCGGGCA ACGGCGGCAC CGTGAGCGAC
GAGCGCTACG ACTGCATCGA CATCACCGAG CCCGCCGCGC TGCGCGAGTG GGCTGCCAAG
GAAAAGATCG CGCTCACCGT CGTCGGGCCC GAGGCGCCGC TGGCAGCGGG CGTGGTCGAC
GAATTCCGCG CGCACGGCCT GCGCATCTTC GGCCCCACGC AGGCCGCCGC GCAGCTCGAG
AGCTCCAAGG CCTTCTCCAA GGCCTTCATG AAGCGCCACA AGATTCCCAC GGCCGAGTAC
GAGGCCTTCA CCGATGCCGC GGCGGCGCAC GCCTACATCG ACGCCAAGGG CGCGCCGATC
GTCGTCAAGG CCGACGGCCT GGCCGCCGGC AAGGGCGTGG TAGTGGCCAT GACCGCGCAG
GAGGCGCACG AGGCGGTCGA CTTCATGCTG GTCGACAACA AGTTCGGCGT CTCGCACAAC
GACGGCGGCG CGCGCGTCGT CATCGAGGAA TTCCTGCAGG GCGAGGAAGC CAGCTTCATC
GTGCTGTGCG ACGGCAAGAA CGTGACCGCG CTGGCCACCA GCCAGGACCA CAAGCGCCTG
CTCGACAACG ACGAAGGCCC CAACACCGGC GGCATGGGCG CCTACTCGCC CGCGCCCGTG
GTCACGGCCG AGGTGCATGC GCGCGCAATG CGCGAAATCA TCCTGCCGAC CATCCGCGGC
ATGGAAAAGG ACGGCATCCC GTACACCGGC TTCCTCTACG CCGGCCTCAT GATCGACGCC
ACCGGCCATC CCAAGACGCT CGAGTTCAAC TGCCGCATGG GCGACCCCGA GACGCAGCCG
ATCATGATGC GGCTCAAGTC CGACCTGTTC GAGGTGTTCT GGCATGCCAC CGACGGCACG
CTCGACCAGG TCGAGCTGCA GTGGGACCGG CGCGTGGCGT TGGGCGTGGT GATGGCGGCG
CACGGCTATC CGCTCTCGCC GCGCAAGGGC GACCGCATCA CCGGCATTCC GCCCGAGGCG
CCCGATGCCG TGGTGTTCCA CGCGGGCACC ACCCAGCAGG ACGGCGAGCT CAAGACCAGC
GGCGGCCGCG TGCTGTGCGT GACCGTGCTG GCCGACAGCG TGAAGCTCGC GCAGCAGCGG
GCCTACGAGG TTGCCGCGCG CATCGGCTTC GACGGCGCGC AATACCGCAA GGACATCGGA
CACCGCGCGG TCCACGCGCG CAACACCCCG CACGCCTGA
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| Protein sequence | MKVLVIGGGG REHALAWRLA QASRVSRVYV APGNGGTVSD ERYDCIDITE PAALREWAAK
EKIALTVVGP EAPLAAGVVD EFRAHGLRIF GPTQAAAQLE SSKAFSKAFM KRHKIPTAEY
EAFTDAAAAH AYIDAKGAPI VVKADGLAAG KGVVVAMTAQ EAHEAVDFML VDNKFGVSHN
DGGARVVIEE FLQGEEASFI VLCDGKNVTA LATSQDHKRL LDNDEGPNTG GMGAYSPAPV
VTAEVHARAM REIILPTIRG MEKDGIPYTG FLYAGLMIDA TGHPKTLEFN CRMGDPETQP
IMMRLKSDLF EVFWHATDGT LDQVELQWDR RVALGVVMAA HGYPLSPRKG DRITGIPPEA
PDAVVFHAGT TQQDGELKTS GGRVLCVTVL ADSVKLAQQR AYEVAARIGF DGAQYRKDIG
HRAVHARNTP HA
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