| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2682 |
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| Symbol | |
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| ID | 7972281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2825751 |
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| End bp | 2826539 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644793270 |
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| Product | Methyltransferase type 11 |
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| Protein accession | YP_002944573 |
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| Protein GI | 239815663 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | [TIGR01934] ubiquinone/menaquinone biosynthesis methyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0179968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGCCAT CGCCTTCCGT CGGGCCCGGG AATCCGACCA TCCTGCCGCC GCACACCCCA
TTGCCGCTGT ACTACAGGAA CGAGGCGGAG CACCAGGCGT TCCTGCGGCG CATCTTCGAC
AGCACCGCCG CCGACTACGA CCGCATCGAA AGCGTGCTGG CCTTCGGCAC CGGCCCGTCG
TACCGCCGCG CCGCCCTCTC GCAGGCCGGG CTCGCTGCGG GCGCGCAGGT GCTCGACGTC
GGCATCGGCA CCGGGCTGGT CGCCCGCGAG GCGCTCAGGA TCATCGGGCC GGCGGGCCGG
CTCGTGGGCG TCGATCCCAG CGTGGGCATG ATGGAACAGG TCGACCTGCC CGGCGTCGAG
CTGGTCCAGG GCGTGGCGGA AGCGCTGCCC CGCCCGGATG CCAGCTGCGA TTTCGTGAGC
ATGGGTTACG CCATGCGCCA CATCAGCGAC GTGGCGGCCG CCTTCGGCGA GTTCCACCGC
GTGCTGCGCC CGGGCGGGCG CCTGGTGGTG CTCGAGATCA CCAAGCCGAA CGGCCGCATC
GCCACCGCGC TGCTCAAGGC CTACATGCGC GCCGTGGTGC CGCTGATCGC GCGCGTGGTC
GGCCGCCGCA GCAACACCTC CGAGTTGTGG CGCTATTACT GGGACACCAT CGAGGCCTGC
ATTCCGCCCG AGCGCGTGCT CGAGGCACTG CGCGCCGCGG GCTTCACCGA CGTGCGCCGC
CACGCGAGCC TCGGCGTGTT CTCCGAATAC ATGGCGCGCA AACCAGAAAA CACCGTCGAG
GCCGGCTGA
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| Protein sequence | MTPSPSVGPG NPTILPPHTP LPLYYRNEAE HQAFLRRIFD STAADYDRIE SVLAFGTGPS
YRRAALSQAG LAAGAQVLDV GIGTGLVARE ALRIIGPAGR LVGVDPSVGM MEQVDLPGVE
LVQGVAEALP RPDASCDFVS MGYAMRHISD VAAAFGEFHR VLRPGGRLVV LEITKPNGRI
ATALLKAYMR AVVPLIARVV GRRSNTSELW RYYWDTIEAC IPPERVLEAL RAAGFTDVRR
HASLGVFSEY MARKPENTVE AG
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