Gene Vapar_2676 details

Gene Information

• Locus tag: Vapar_2676
• ID: 7972275
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 2820694
• End bp: 2821476
• Gene Length: 783 bp
• Protein Length: 260 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 644793264
• Product: Methyltransferase type 11
• Protein accession: YP_002944567
• Protein GI: 239815657

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0638681
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGCGG TGCTGCCTTC TTCGTCGTCG TCGTCTTCTT CCACCGATGC CGCCTGGCGC 
GAGCTGCATG AGGCCGCCAC CGTTCCCTAC AAGAAGGGCG GCAGCTTCGC CTGGCATTTC 
GCGCGCGGCA AGCTGGGGCG CGATCCGGTG TTCCGCGGGC TGCTCGAACG CGGGCTGATC 
GATGCAGCTC ACCGGCGCGT GGTCGACATC GGCTGCGGGC AGGGGCTCTT CGCGAGCCTG 
CTCGCGTCGA TGAGCCGCAT GCAGGCGCAC GGCCGCTGGC CCTCGTCGTG GAAGCCCACG 
CCGCCGGCCG CCGACTACAC GGGCATCGAG CTGATGCCCA AGGACGTGGC GCGCGCCGAG 
GCTTCCATCG GGCACCTGCA GCCGGCGCCG CGGCTGGTCT GCGCCGACAT GTGCTCGGTG 
CCGCTGCCCG AATGCGACCT GGTCGTGATC CTCGACGTGC TGCACTACGT GGGCATCGAC 
GCGCAGGACG GCGTCCTGCG GCGGGTGCAC GACGCGCTTC GGCGCGGCGG CAGTGCGAAC 
GCCCGGCTGC TGCTGCGCGT GGGCGATGCA TCGAGCAAGC GCGGCTTTGC CATCAGCCAG 
TGGGTCGACC GCACCGTGAC GCGCGTCCGA GGCCACAAGG TGTCGCCCAC CTGGGGCCGT 
CCGCTGTCCG ACTGGGTGGC GGCGCTGCAG CGGCTGGACT TTCGCGTCCA GAGCATTCCG 
ATGAGCAAGG GAACGCCCTT TGCCAACGTG CTGCTGGTGG CCGACCTGGA GCATCGGGCG 
TGA 

 

Protein sequence

MSAVLPSSSS SSSSTDAAWR ELHEAATVPY KKGGSFAWHF ARGKLGRDPV FRGLLERGLI 
DAAHRRVVDI GCGQGLFASL LASMSRMQAH GRWPSSWKPT PPAADYTGIE LMPKDVARAE 
ASIGHLQPAP RLVCADMCSV PLPECDLVVI LDVLHYVGID AQDGVLRRVH DALRRGGSAN 
ARLLLRVGDA SSKRGFAISQ WVDRTVTRVR GHKVSPTWGR PLSDWVAALQ RLDFRVQSIP 
MSKGTPFANV LLVADLEHRA