Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2671 |
Symbol | |
ID | 7972819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2814157 |
End bp | 2815866 |
Gene Length | 1710 bp |
Protein Length | 569 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644793259 |
Product | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ |
Protein accession | YP_002944562 |
Protein GI | 239815652 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.669798 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGCCG ATACCCGCCT GCTGCCGCTG ATCGCCAACC GGGACCTCGA TGCACCGCTG GCCTGGCGCG CCGGCGTGCC GGTGAGCACG CGCCAGTTCC TGGCCGACGT GGCCCGCTTC GCGCCGCTGC TGCCGGCCGA GGGCCGGGCC GTCAATCTCT GTGTCGACCG CTATGCGTTT GCGGTCGGCC TGGCCGCTGC GCTGGTGCGC GGCCATGCGA GCCTGCTGCC GCCCGACGCG CGGCCCGACA CGCTCGCGCG CCTGCTCGAA TCCGGCGGCT CGAATCTTTT CGCGCTGACC GATGACGCCG CGCTCGCCAC GCCCGGCATG CCGCGCCTGC TGGTCGAATA CCGCGGCGGC TCCGAAGGCG ATGCGGGCCT CGAGCTTCCG GCCATCGACG GCGCCATGCA CGCGGTGAGC CTGCTGACCT CCGGCTCCAC CGGTGCGCCG CAGCCGCATG CCAAGCGCTG GGACACGCTG GTCGGCGACG TCGCGGTGGC GGTGGAGCGG CTCTCCAGCC TGCTCGGTCT GCCATCGCTC GCCGGCCTGA CGCTGGTGGC GACCGTGCCC GTGCAGCACA GCTACGGGCT GGAATCATCG GCGCTGCTGG CCATGCTCGG CGGCGCCGCG TTCGACAGCG GACGGCCGTT CTTTCCAGCC GACGTGGCCA AGACGCTGGC TTCGGTGCCA CGCCCCCGCG CACTGGTCAC CACGCCTTTC CACCTGAAGA CGCTGCTGCT CTCGGGCATC GAGCTGCCGC CGGTCGACCT GGTGCTTTCC GCCACCGCGC CGCTCTCGCC GCAGCTCGCG GCCCAGGCCG AGCAGGCGCT CGGCGGCGTG CTGATCGAGA TCTACGGCAG CACCGAGTCC GGCCAGGTCG CCACCCGCCG CACCACGCAG AGCGAAGTCT GGGAGACCTT CGGAGATATC CGCGTGCACG CCCAGCCAGG GGAGGGCGAC GGGGCCGAGC GCTTCATCTT CAGCGGCGAC TTCCTGCCCG AGCCCACGCC CATGGCCGAC GTGCTCGAAC TGCTCGACGC ACGGCGCTTC CGGCTGCTGG GCCGCGCCAA CGACCTGATC CATGTCGCGG GCCGGCGCAG CTCGCTCGCG CACTTGAACT ACCACCTCAA CAGCATCGCG GGCGTCGAGG ACGGCGCGTT CTGGCTGCCC GACGAAGTGG CCGACGGCGT GGTGCGTCCG GTGGCCTTCG TGGTCGCGCC CACGCTCTCG GCCGGCCAGA TCATTGCCGC GCTGCGCCAG CGGCTGGAGC CGGTGTTCGT GCCGCGCCGC GTGGTGCAGG TGAAGGCCTT TCCGCGCGAA GGCACCGGCA AGCTCACGGC GCGCGCGCTG CGCGAATTCG CGCTCGCGCA GCTGGCAGAA GACGACACAC CGGTGCAGCT GGCCCATGCG GTGCCGGTCG ACCATCCGGC ATTCGCGGGC CACTTCCCCG GCCAGCCGCT GCTGCCGGGA GCGCTGATAC TGGCCGAGGT CATGGAAGCC GTGCAGCGCG TGCCCGCGCT GGCCGCCCGG CTGGGTGCCC ATCCCACGCT CGCGGCCGCC AAGTTCCTGG CACCCGTGCG GCCGGGCAGC ATGCTCTCCA TCGAGCTGCA GCCCGAGTCC GGCGCCGCGC GCGGCGTGCG CTTCGACGTG CGCTGCGACG GCGTGCTGGC TGTCACCGGC CGCTGGGCCG CCGTGCCAGA GTCTGCGTGA
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Protein sequence | MSADTRLLPL IANRDLDAPL AWRAGVPVST RQFLADVARF APLLPAEGRA VNLCVDRYAF AVGLAAALVR GHASLLPPDA RPDTLARLLE SGGSNLFALT DDAALATPGM PRLLVEYRGG SEGDAGLELP AIDGAMHAVS LLTSGSTGAP QPHAKRWDTL VGDVAVAVER LSSLLGLPSL AGLTLVATVP VQHSYGLESS ALLAMLGGAA FDSGRPFFPA DVAKTLASVP RPRALVTTPF HLKTLLLSGI ELPPVDLVLS ATAPLSPQLA AQAEQALGGV LIEIYGSTES GQVATRRTTQ SEVWETFGDI RVHAQPGEGD GAERFIFSGD FLPEPTPMAD VLELLDARRF RLLGRANDLI HVAGRRSSLA HLNYHLNSIA GVEDGAFWLP DEVADGVVRP VAFVVAPTLS AGQIIAALRQ RLEPVFVPRR VVQVKAFPRE GTGKLTARAL REFALAQLAE DDTPVQLAHA VPVDHPAFAG HFPGQPLLPG ALILAEVMEA VQRVPALAAR LGAHPTLAAA KFLAPVRPGS MLSIELQPES GAARGVRFDV RCDGVLAVTG RWAAVPESA
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