| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2652 |
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| Symbol | |
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| ID | 7972414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2795103 |
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| End bp | 2796548 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644793240 |
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| Product | phospholipase D/Transphosphatidylase |
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| Protein accession | YP_002944543 |
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| Protein GI | 239815633 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.577493 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATCCTCC CCGAGCTCAG TCAGGAATGG AAAACCGGCC TCTCTCTGGC CTGGAGCGGC
TATATCGCCG TGCTGTCGGT CTGGATCGTG ATGCAGAAGC GTGCGCCGGT GTCCACCATG
AGCTGGATCC TGTCGCTCGC GCTGCTGCCG TTCGCGGGCT TCGTCATCTA TTACTTCCTC
GGGCCGCAGC GCCTGCGCAA GCAGCGCGTC AAGCGCCTGC GCAGCCGGGC CAGCGCGCAC
ACGCAGGCCG ACCTGGCGCG GCTGCGCGAC GCGGCGCAGA ACGCGCCGCC GGCGCTGCAG
CAGATGGCGC GGCTGGGCAC CGCGGCCTGC GGGCTGCCGG TTTCCAGCGC GACGGGCGTG
GCGCTGCTCT CGGGCGGCGC GCGCACCTTC GACGCCATCT TCGACGCGGT GCGCGCGGCG
CGCGACCACG TTCACCTCGA GTACTACATC TTCGAGCCCG ACAGGATCGG CACCGCGCTG
CGCGACCTGC TGGTGGAGCG CGCCGGCCAG GGCGTGTCCG TGCGCCTGCT GCTCGACGCA
CTGGGTTCCA AGCGCATCGG CCGCAAGTTC ATGGCGCCGC TGCATGCCGC GGGCGTGCAG
GTTGCGCTCT TCCACGACAC GCGCATCGGC CGCCGCCTGC GCCCGGTGAC CAACTACCGC
ACCCACCGCA AGATCGTGGT GTGCGACGGC CGCGTGGGCT TTACCGGCGG CGTCAACATC
ACCGACGAGG AAGACAAACG CACCCGGCCC GACGCCTACC ATGACGTCCA CCTGCGCATC
GAGGGCAGCG CGGTGCGCTG GCTGCAGACC ACCTTCCTGG AGGACTGGAC CTATGCCACC
GGCGAAGACC TGCGCGACAT CGACCACCTG ATGGGCGCCA TGCTGCCGCA GGTCGAGGCC
GGCGACATTC CCGTGCAGAT CGTGACCAGC GGCCCCGACA ACATGCTGGA ACCCATCCAC
CGCATGCACG TGGAGGCGAT CCATTCGGCG AGCGAGCGGG CCTGGCTCAC CACGCCGTAC
TTCGTGCCCG GCGAGCCCGC CATGATGGCG CTCACCAGCG CGGCGCTGCG CGGCGTGGAT
GTGCGCCTGC TGGTGCCGCG GCGCAGCGAT TCGGCCATTG TGAGCGCGGC CGCGCGCTCC
TACTTCGACG AGCTGATTGC GTCGGGAGTC AAGGTCTGGG AATACAAGGC GCGCATGCTG
CATTCCAAGA CCTTGGTGGT CGACGACCAT TGCGCGATGA TCGGTACCGC GAATTTCGAC
AACCGCAGCT TCAGGCTCAA TTTCGAAGTG AGCGCGGTGG TCTACGGCCC CGAGCTGGCA
CGCCCCCTGG CCGCGCAGTT CGAGACCGAC CTGCACAGCT CCGGCGCAGT GCGCGCCCAC
CGGCCGCAGA GTTTCTGGCG CCGCCTCGGC GACGCGCTTG CACGATTGTT TTCCCCCTTG
CTCTGA
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| Protein sequence | MILPELSQEW KTGLSLAWSG YIAVLSVWIV MQKRAPVSTM SWILSLALLP FAGFVIYYFL
GPQRLRKQRV KRLRSRASAH TQADLARLRD AAQNAPPALQ QMARLGTAAC GLPVSSATGV
ALLSGGARTF DAIFDAVRAA RDHVHLEYYI FEPDRIGTAL RDLLVERAGQ GVSVRLLLDA
LGSKRIGRKF MAPLHAAGVQ VALFHDTRIG RRLRPVTNYR THRKIVVCDG RVGFTGGVNI
TDEEDKRTRP DAYHDVHLRI EGSAVRWLQT TFLEDWTYAT GEDLRDIDHL MGAMLPQVEA
GDIPVQIVTS GPDNMLEPIH RMHVEAIHSA SERAWLTTPY FVPGEPAMMA LTSAALRGVD
VRLLVPRRSD SAIVSAAARS YFDELIASGV KVWEYKARML HSKTLVVDDH CAMIGTANFD
NRSFRLNFEV SAVVYGPELA RPLAAQFETD LHSSGAVRAH RPQSFWRRLG DALARLFSPL
L
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