Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2648 |
Symbol | |
ID | 7972410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 2790136 |
End bp | 2790459 |
Gene Length | 324 bp |
Protein Length | 107 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644793236 |
Product | TolA protein |
Protein accession | YP_002944539 |
Protein GI | 239815629 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.298566 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAAA TTCTCGCAGT CATGATCGCT GGCCTGTTCG CCGCTGGCGC CTACGCCCAG AACCCCACCG GCACCACGCC CGAGCAAGGG AACGCCACCA ACAGCAAGCC GCAAGCCCGC GCCGAAGCGA AGAAGGAAGC CAAGCCCGCA GGCCAAGTGG CTGCTCCCAC TGGCGACATC GCCAAGACGC CCGAAGGCGG CACGTTCGGC GCCGACAAGG CTGGCGTTGC CGGCGAAAAG CGCGCCAAGA CCCGCGACGA CCGCCGCCGC AACAAGGATG GCAGCGTGAA GCGCAAGTCG ACCCAGGGCG GCACGCCCCA GTAA
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Protein sequence | MSKILAVMIA GLFAAGAYAQ NPTGTTPEQG NATNSKPQAR AEAKKEAKPA GQVAAPTGDI AKTPEGGTFG ADKAGVAGEK RAKTRDDRRR NKDGSVKRKS TQGGTPQ
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