Gene Vapar_2648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2648 
Symbol 
ID7972410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp2790136 
End bp2790459 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content67% 
IMG OID644793236 
ProductTolA protein 
Protein accessionYP_002944539 
Protein GI239815629 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.298566 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAAA TTCTCGCAGT CATGATCGCT GGCCTGTTCG CCGCTGGCGC CTACGCCCAG 
AACCCCACCG GCACCACGCC CGAGCAAGGG AACGCCACCA ACAGCAAGCC GCAAGCCCGC
GCCGAAGCGA AGAAGGAAGC CAAGCCCGCA GGCCAAGTGG CTGCTCCCAC TGGCGACATC
GCCAAGACGC CCGAAGGCGG CACGTTCGGC GCCGACAAGG CTGGCGTTGC CGGCGAAAAG
CGCGCCAAGA CCCGCGACGA CCGCCGCCGC AACAAGGATG GCAGCGTGAA GCGCAAGTCG
ACCCAGGGCG GCACGCCCCA GTAA
 
Protein sequence
MSKILAVMIA GLFAAGAYAQ NPTGTTPEQG NATNSKPQAR AEAKKEAKPA GQVAAPTGDI 
AKTPEGGTFG ADKAGVAGEK RAKTRDDRRR NKDGSVKRKS TQGGTPQ