Gene Vapar_2645 details

Gene Information

• Locus tag: Vapar_2645
• ID: 7972407
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 2788587
• End bp: 2789168
• Gene Length: 582 bp
• Protein Length: 193 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 644793233
• Product: Superoxide dismutase
• Protein accession: YP_002944536
• Protein GI: 239815626
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0605] Superoxide dismutase

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.22582
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACATG TGCTCCCACC CCTGCCATAC GCCCTTGACG CGCTGGCACC CGAGTACTCG 
AAGGAGACCC TCGAGTACCA CTACGGCAAG CACCACAATG CCTACGTGGT GAACCTCAAC 
AACCTGCAAA AGGGCACCGA GTTCGAGTCG ATGCCTCTCG AGGACATCGT CAAGAAGTCC 
AGCGGCGGCA TCTACAACAA CGCCGCCCAG ATCTGGAACC ACACCTTCTT CTGGAGCTGC 
ATGAAGCCCC AGGGCGGCGG TGCCCCCACG GGCGCGCTGG CCAAGGCCAT CGATGCCAAG 
TGGGGCAACT ACGACGCCTT CAAGGAAGCC TTCGTGAAGT CGGCCGTGGG CAACTTCGGC 
TCGGGCTGGA CCTGGCTGGT GAAGAAGGCC GACGGCTCGG TGGACATCGT GAACATGGGT 
GCCGCGGGCA CGCCGCTGAC CACCGGCGAC ACCCCGGTGC TGACGGTGGA CGTCTGGGAG 
CACGCCTACT ACATCGACTA CCGCAACCTG CGCCCCAAGT TCGTCGAGAC CTTCCTGGCC 
AAGCTGGTGA ACTGGGACTT CGCGGCCAAG AACTTCGGCT GA 

 

Protein sequence

MEHVLPPLPY ALDALAPEYS KETLEYHYGK HHNAYVVNLN NLQKGTEFES MPLEDIVKKS 
SGGIYNNAAQ IWNHTFFWSC MKPQGGGAPT GALAKAIDAK WGNYDAFKEA FVKSAVGNFG 
SGWTWLVKKA DGSVDIVNMG AAGTPLTTGD TPVLTVDVWE HAYYIDYRNL RPKFVETFLA 
KLVNWDFAAK NFG