| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2644 |
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| Symbol | |
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| ID | 7972406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2787226 |
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| End bp | 2788536 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644793232 |
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| Product | exodeoxyribonuclease VII, large subunit |
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| Protein accession | YP_002944535 |
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| Protein GI | 239815625 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1570] Exonuclease VII, large subunit |
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| TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.603733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACCTGC GTGACTCGAA TCCAACGCCG GGCCCGCGGA TCTGGGCTGT GGGCGCGCTG
TGCCGGGCGG TGGCCGACGC GCTCGATGCG CGCTTCAACC CGGTCGCGGT GCGCGGCGAG
ATTTCCGGCT TCTCGCGCGC GTCGAGCGGA CATTGTTACT TCGCGCTCAA GGATTCGTCC
GGCCAGCTGC GCTGCGCGAT GTTCCGGCGC GCCGCGGGCC TGCTCGATTT TTCGCCGCGC
GACGGCGACC AGGTCGAAGT GCGCGGGCGG CTCGCGGTGT ACGAACCGCG CGGCGACCTG
CAACTGGTGG TCGAAAGCCT GCAGCGCGCC GGCCAGGGCG CGCTGTTCGA GCAATTCCTG
CAGCGCAAGG CGCGGCTCGA GGCCGAAGGG CTCTTCGATC CGGAGCGCAA GCGGGCGCTG
CCGGTCATGC CGCGCGCGGT CGGCCTCGTC ACCTCGCTCG GCGCCGCGGC GCTGCACGAC
GTGGTCACGG CGCTGCGGCG CCGCGTGCCG CACATTCCCG TGGTGCTGGC GCCGGCGGCG
GTGCAGGGCG CCAACGCGCC GGCGGAACTC GTGCGCGCGC TGCAATCGCT GTACGCACTG
GAACCGGCCG TCGACGTGAT CCTGCTGGTG CGCGGCGGCG GCTCCATCGA GGATCTCTGG
GCGTTCAATG ATGAAGCCCT GGCGCGCACC ATCGTCCAAA GCCCGGTTCC GCTGATCTGC
GGCGTCGGCC ACGAAACCGA CTTCACCATC GCCGACTTCT GCGCCGACCT GCGCGCGCCC
ACGCCCACGG CCGCGGCGGA GCTCGTCAGC GCGCCCCAGG CGATGTGGCT CGGTGCGATC
GATCTGCTGG ATGAACGGCT CGACAGCGCA CTGGGTGCGC GCCTCGATGT ACTGGGGCAG
CGCCTCGACC AGGCGGCAGC GCGCCTGGGC CGGCCCTCCG GGCTGGTGGC GCGCCAGCAG
CTGCGGCTCG CGCATCATTC GCAGCGGCTG CGCTATGCGC TGCTGTCCAG GGCCGAGCGC
CTGGCCCAGG TGCCGCGCGC GATTGCTGCC GATTTTCCGC TCAGGCTCGA GCGCGCGATG
GCGCAGCGGC GCGAGCGGCT GGAACGCGTC GCCCTGCGCC TGCGGCTGCT CGATCCTGCG
CTGGTGCTCC AGCGCGGCTA TGCCTGGCTC ACCGATCCCG ACGGCCGCGC GATCGTCAGC
GCCAAGAAGC TGAGCCCGGG CGATGCCGTG GTCGCGCGGC TCGCCGATGG TTCGGTCGAC
CTGGCCGTCG TGCCCGGCAA AACGGGAACG CGTCCGACGC CGGGCGCGTA A
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| Protein sequence | MNLRDSNPTP GPRIWAVGAL CRAVADALDA RFNPVAVRGE ISGFSRASSG HCYFALKDSS
GQLRCAMFRR AAGLLDFSPR DGDQVEVRGR LAVYEPRGDL QLVVESLQRA GQGALFEQFL
QRKARLEAEG LFDPERKRAL PVMPRAVGLV TSLGAAALHD VVTALRRRVP HIPVVLAPAA
VQGANAPAEL VRALQSLYAL EPAVDVILLV RGGGSIEDLW AFNDEALART IVQSPVPLIC
GVGHETDFTI ADFCADLRAP TPTAAAELVS APQAMWLGAI DLLDERLDSA LGARLDVLGQ
RLDQAAARLG RPSGLVARQQ LRLAHHSQRL RYALLSRAER LAQVPRAIAA DFPLRLERAM
AQRRERLERV ALRLRLLDPA LVLQRGYAWL TDPDGRAIVS AKKLSPGDAV VARLADGSVD
LAVVPGKTGT RPTPGA
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