Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2640 |
Symbol | |
ID | 7972402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 2784577 |
End bp | 2784759 |
Gene Length | 183 bp |
Protein Length | 60 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644793228 |
Product | protein of unknown function DUF343 |
Protein accession | YP_002944531 |
Protein GI | 239815621 |
COG category | [S] Function unknown |
COG ID | [COG2835] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.946245 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATACCA AGCTGCTTGA ACTGCTCGTC TGCCCCGTCA CCAAGGGCCC GCTGACCTGG AACCCGGAGA AGCAGGAGCT CTGCTCGCGC AGCGCACGCC TGGCCTATCC GGTGCGCGAC GGCATCCCCG TGCTGCTCGA GAACGAGGCC CGCACCCTGT CCGACGAAGA GCTGGGGCTG TGA
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Protein sequence | MDTKLLELLV CPVTKGPLTW NPEKQELCSR SARLAYPVRD GIPVLLENEA RTLSDEELGL
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