| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2636 |
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| Symbol | |
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| ID | 7972398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2781240 |
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| End bp | 2781923 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644793224 |
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| Product | LexA repressor |
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| Protein accession | YP_002944527 |
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| Protein GI | 239815617 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
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| TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.270851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGTTCG CCGTGAAGCT TACCGCCCGC CAGCAGCAGA TCCTGGACTT GATCCAGAGC
GCCATCGCCC GTACCGGCGC GCCGCCTACG CGGGCCGAAA TCGCCAATGA GCTGGGTTTC
AAGTCGGCCA ATGCCGCCGA GGAGCACCTG CAGGCCCTGG CCCGCAAGGG CGTGATCGAA
CTCGTGAGCG GCACTTCGCG CGGCATCCGG CTCAAGGGCG ACGCGCTGCG TTCGCTCAAC
GAGTCGCGCC ACCGCGAAGG CGGCCAGTTC TCCCTCTCGC TGCCCGGCAT GTCGCAGCTC
GCGCTGCCCC TCATCGGCCG TGTGGCGGCG GGCTCGCCAA TCCTCGCGCA AGAGCACGTC
GACCAGACCT ACTACGTCGA GAACACGCTG TTCCAGCGCC AGCCCGACTA CCTGCTCAAG
GTGCGCGGCA TGTCCATGCG CGATGCCGGC ATCATGGACG GCGACCTGCT CGCGGTCCAG
GCCACCAAGG AGGCGCGCAA CGGCCAGATC GTGGTGGCAC GCCTGGGCGA CGAGGTCACG
GTCAAGCGCC TCAAGCGCAA CAAGCAGGTC ATCGAGCTGC ACGCTGAAAA CCCCGACTAC
CCGACCATCG TGGTCCAGCC CGGCGAGCCC TTCGAGATCG AAGGCCTGGC GGTGGGCCTC
ATCCGCAACA CCATGCTGAT GTAG
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| Protein sequence | MQFAVKLTAR QQQILDLIQS AIARTGAPPT RAEIANELGF KSANAAEEHL QALARKGVIE
LVSGTSRGIR LKGDALRSLN ESRHREGGQF SLSLPGMSQL ALPLIGRVAA GSPILAQEHV
DQTYYVENTL FQRQPDYLLK VRGMSMRDAG IMDGDLLAVQ ATKEARNGQI VVARLGDEVT
VKRLKRNKQV IELHAENPDY PTIVVQPGEP FEIEGLAVGL IRNTMLM
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