| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2614 |
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| Symbol | |
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| ID | 7972376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2758105 |
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| End bp | 2758899 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644793202 |
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| Product | tRNA/rRNA methyltransferase (SpoU) |
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| Protein accession | YP_002944505 |
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| Protein GI | 239815595 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.52753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAGTC CCACCGGCGC GAATCACATC AGTTCGCGCG ACAACCCCCT GCTCAAGGAG
CTGCGCAAGC TGGCCCAGGA CCCGGGCGCC TACCGCAGGC TCGGCCGGGT CTGGCTCGAA
GGCGACCATC TCTGCCGGGC GGCGCTTGCG CGCGGCATCC GGCCTGCGGT CGCGGTCTTT
TCGGAGTCCT TCTGGCCGTC GGCGCCCGCC GAATGGGCGA GTTCTGCTAT CAAAACGGTA
GTTGTCGACG ACGATCTGCT GCGGGCCGTC AGCGGCCTGG AGTCGCCTGC GCCAATGGGC
TTCGTGCTCG ATCTGCCGGC GCGGCCGGAA CTGCTTCCCG ATGCGCCCAG CGTGGTGCTC
GACCGCCTGC AGGACGCCGG CAACGCCGGC TCCATCCTGC GCAGCGCGGC GGCTTTCGGG
TTCAAGCAGG TGATCGCGCT CAAGGGCACG GCCGCCCTGT GGGCGCCGAA GGTGCTGCGC
GCCGGCATGG GCGCGCATTT CGGGCTGCGG CTGATCGAAG GCGTGGAGGC CGATGCGCTC
GACGAACTCA AGGTGCCGCT CGTGGCCACC AGTTCCCACC GGGGCGACTG GCTGCATGAG
GCGAGGCTGC CGCATCCCTG CGCATGGCTG CTGGGGCACG AAGGGCAGGG CGTTTCAGCG
GCGCTGGAAG CCCGCGCCAG CCATCACATC CGGATTGCGC AGCCGGGCGG CGAGGAGTCG
CTGAACGTGG CGGCTGCGGC GGCGATCTGC CTGCACGCGA GCGGCGCCGC GGCGCTTGTC
CAGGCGGCTT CCTGA
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| Protein sequence | MTSPTGANHI SSRDNPLLKE LRKLAQDPGA YRRLGRVWLE GDHLCRAALA RGIRPAVAVF
SESFWPSAPA EWASSAIKTV VVDDDLLRAV SGLESPAPMG FVLDLPARPE LLPDAPSVVL
DRLQDAGNAG SILRSAAAFG FKQVIALKGT AALWAPKVLR AGMGAHFGLR LIEGVEADAL
DELKVPLVAT SSHRGDWLHE ARLPHPCAWL LGHEGQGVSA ALEARASHHI RIAQPGGEES
LNVAAAAAIC LHASGAAALV QAAS
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