| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2613 |
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| Symbol | rnhB |
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| ID | 7972375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2757374 |
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| End bp | 2758096 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644793201 |
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| Product | ribonuclease HII |
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| Protein accession | YP_002944504 |
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| Protein GI | 239815594 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0164] Ribonuclease HII |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.750571 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGATCCA GAAAGTTCTT GAAGGCTGAG CAGGCGGCCC TCGTGTGGGA CGCGCCGGGC
CTCGTTGCGG GCGTCGACGA GGCGGGCCGC GGGCCACTGG CCGGCCCGGT CGTCGCGGCA
GCGGTCATCC TGGACGACCA GCGGCCGATC CGCGGCCTGG CCGATTCCAA GACGCTCACG
GCCTTGCAGC GCGAACGCCT GAACGACCAG ATCCTTGCCA AGGCGCTGTG CTGCTCGGTG
GCCCAGGCCA CGGTCGAGGA AATCGACACC CACAACATCC TGCAGGCCAC CATGCTCGCG
ATGCGCCGCG CAGTCGAGGG CCTGCGCCTG AAGCCCGCCA AGGTGCTGGT CGACGGCAAC
CGCCTGCCCA CGCTCGACGT GCTGGCCGAG GCCATCGTCA AGGGCGACGC GCGGATCAAG
GCGATTTCCG CCGCCTCGAT CCTGGCCAAG GTCCATCGCG ACCGGCTGTG CGAGCAACTG
CACCTGGAGT TTCCGCACTA CGGCTTTGCC GGCCACAAGG GCTACGGCAC GCCGGAGCAC
CTGGAGGCGC TGCAGCGCCA TGGCGCGTGC ATTCATCACC GCAGGTCGTT CAGCCCGGTG
GCCGCGGCGC TGGCGCGCAC GGCGGAGGGC GCCGCGGCGC TCGTGCTCGA GGCCTCGATG
CAGGTTCCGG CCGAATTTCC GGCGGCCGAG ACTGTGCACC TCGACCTGCG CACCGCGCCT
TGA
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| Protein sequence | MRSRKFLKAE QAALVWDAPG LVAGVDEAGR GPLAGPVVAA AVILDDQRPI RGLADSKTLT
ALQRERLNDQ ILAKALCCSV AQATVEEIDT HNILQATMLA MRRAVEGLRL KPAKVLVDGN
RLPTLDVLAE AIVKGDARIK AISAASILAK VHRDRLCEQL HLEFPHYGFA GHKGYGTPEH
LEALQRHGAC IHHRRSFSPV AAALARTAEG AAALVLEASM QVPAEFPAAE TVHLDLRTAP
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