| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2612 |
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| Symbol | |
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| ID | 7972374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2756254 |
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| End bp | 2757402 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644793200 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_002944503 |
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| Protein GI | 239815593 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCAAGG ACGAACAGCG ACGCTTCGCG CTGGTCGCGG GAGAAGCTTC CGGCGACCTG
CTCGCAGGCC TTCTTCTCGA CGGCCTGCAG GCGCGTTGGC CCTCGCTCCA GACCATGGGC
ATCGGCGGGC CCCGCATGCT CGCGCACGGG CTGCAGAGCT GGTGGCCGCA GGAAAAGCTT
GCGGTGCGCG GCTACATCGA AGTGCTGCGC CACTACGCCG AGATCGCGGG CATCCGCCGG
CAGCTCAAGG CGCGGCTGCT GCGCGAATGG CCCGAACTCT TCATCGGCGT CGACGCGCCC
GATTTCAATC TCGATCTCGA AGCCGGGCTG CGCAGCCGCG GCATGAAGAC CGTGCACTTC
GTCTGCCCGT CGATCTGGGC CTGGCGCGCC GACCGCATCG AAAAGATCCG GGCCGCGGCC
GACCACGTGC TGTGCATCTT TCCGTTCGAG CCGGCACTGC TGGCCGAACA TGACGTGCAG
GGCAGCTACG TCGGCCATCC GCTGGCCAAT GTGATTCCGA TGGTGCCCGA CCGCGCCGGG
GCGCGCGCGG CCCTCGGCCT TGCGCCGGAT GCGCAGGTCG TGGCCCTGCT GCCGGGCAGC
CGCCGTTCGG AAGTGCGCTA CCTCGCTGCG CGGTTCTTCG CCGCCGCGGC GCAGATGCTG
AAGGCGCGGC CCGCACTCCG CTTCGTCGCC CCCATCCTGC CGGGGCTGCG CGTCGAGGTC
GAGGCGCTGC TGCAGGCCAG CGGCGCAGCG GGGCGGGTGC AACTGCTCGA CGGCCAGTCG
CATGCAGCGC TGGCCGCCTG CGACGCCACC CTGATCGCCA GCGGCACCGC CACGCTCGAG
GCGGCGCTGT TCAAGCGGCC GATGGTCATC GCGTACAACA TGAATGCGCT GTCATGGCGC
CTGATGCAGC GCAAGCAGCT CCAGCCATGG GTCGGCCTGC CCAACATCCT GTCGCGTGAA
TTCGTGGTGC CCGAGCTGCT GCAGGAGGCC GCCACGCCGC AGGCGCTGGC CGACGCCACG
CTCGCCTGGC TCGACGCGCC CGAGAAAACG CAGGCGCTGC AACAAAAATT TTCAGAGCTG
CACGTGCAAC TGCAGCGCGA TACGCCCACA CTTTGCGCCG ATGCGATCCA GAAAGTTCTT
GAAGGCTGA
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| Protein sequence | MGKDEQRRFA LVAGEASGDL LAGLLLDGLQ ARWPSLQTMG IGGPRMLAHG LQSWWPQEKL
AVRGYIEVLR HYAEIAGIRR QLKARLLREW PELFIGVDAP DFNLDLEAGL RSRGMKTVHF
VCPSIWAWRA DRIEKIRAAA DHVLCIFPFE PALLAEHDVQ GSYVGHPLAN VIPMVPDRAG
ARAALGLAPD AQVVALLPGS RRSEVRYLAA RFFAAAAQML KARPALRFVA PILPGLRVEV
EALLQASGAA GRVQLLDGQS HAALAACDAT LIASGTATLE AALFKRPMVI AYNMNALSWR
LMQRKQLQPW VGLPNILSRE FVVPELLQEA ATPQALADAT LAWLDAPEKT QALQQKFSEL
HVQLQRDTPT LCADAIQKVL EG
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