| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2611 |
|---|
| Symbol | |
|---|
| ID | 7972373 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | + |
|---|
| Start bp | 2755446 |
|---|
| End bp | 2756234 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644793199 |
|---|
| Product | acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase |
|---|
| Protein accession | YP_002944502 |
|---|
| Protein GI | 239815592 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1043] Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase |
|---|
| TIGRFAM ID | [TIGR01852] acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.672056 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAGG TTCATCCCAC AGCGCTCGTC GACCCGAAGG CACAGCTGGA CGCCTCCGTT
TCGGTCGGGC CCTACACCGT GATCGGTCCG CACGTGCGGG TCGGCGCCGG CACGACCATC
GGTGCGCATT GCGTGATCGA AGGGCGCACC ACCATCGGCC GCGACAACCG GATCTTTCAG
TTTTCCTCGC TCGGCGCCAT TCCGCAGGAC AAGAAATACG CGGGTGAGCC CACCGAGCTG
GTCATCGGCG ACCGCAACGT CATCCGCGAG TTCTGCACCT TCAACCTCGG CGTGCCGGGG
GCGGGGGGCG TGACGACCGT GGGCAACGAC AACTGGATCA TGGCGTACAC GCACATTGCG
CATGACTGCC ATGTCGACAA CCACACCACG CTGGCCAACA ACACCACGCT GGCCGGCCAC
GTGCACCTGG CCGACTGGGT CACGATCGGC GGGCTGACGG GCATCCACCA GTTCGTCTCG
GTCGGCGCGC ATGCCATGGT CGGCTTTGCC AGCGCCGTGT CGCAGGACGT GCCTCCCTTC
ATGCTGGTCG ACGGCAATCC GCTGGCGGTG CGCGGCTTCA ACGTGGTGGG CCTGCGCCGG
CGCGATTTTT CGGCGCCCCG CCTGGCCGCG GTCAAGCAGA TGCACCGCCT GCTGTACCGG
CAGGGCAAGA CGCTCGAAGA AGCGCGCGCC GGCATCGCCG CCCTGGCCAC CGAAATGCCG
GAAGCGGCCG CCGACGTGGC GCTGATGGAG CAGTTCCTGG CCACATCGAC TCGCGGCATC
GCGCGTTGA
|
|---|
| Protein sequence | MTQVHPTALV DPKAQLDASV SVGPYTVIGP HVRVGAGTTI GAHCVIEGRT TIGRDNRIFQ
FSSLGAIPQD KKYAGEPTEL VIGDRNVIRE FCTFNLGVPG AGGVTTVGND NWIMAYTHIA
HDCHVDNHTT LANNTTLAGH VHLADWVTIG GLTGIHQFVS VGAHAMVGFA SAVSQDVPPF
MLVDGNPLAV RGFNVVGLRR RDFSAPRLAA VKQMHRLLYR QGKTLEEARA GIAALATEMP
EAAADVALME QFLATSTRGI AR
|
|---|
| |