Gene Vapar_2610 details

Gene Information

• Locus tag: Vapar_2610
• ID: 7972372
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 2754970
• End bp: 2755422
• Gene Length: 453 bp
• Protein Length: 150 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 644793198
• Product: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ
• Protein accession: YP_002944501
• Protein GI: 239815591
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
• TIGRFAM ID: [TIGR01750] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.874568
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGACGA CGACGCTCGA TATCCATCAA ATCCTCAAGC TGCTGCCCCA CCGCTACCCG 
TTCCTGCTGG TGGATCGCGT GCTGGACATG GAAAAGGGCA AGCGCATCAC GGCGCTCAAG 
AACGTGACAA TGAACGAGCC GTTCTTCAAC GGCCACTTCC CGCACCGTCC GGTGATGCCG 
GGCGTGCTCA TGCTCGAAGC CATGGCGCAG GCGGCCGCGC TGCTGTCGTT TCATTCGCTG 
GACATCGTGC CTGACGACAA CACGGTCTAC TACTTCGCGG CCATCGACGG CGCGCGCTTC 
AAGCGCCCCG TGGAGCCGGG CGACCAGCTC ACGCTCGAAG TCGAGATCGA GCGCATGAAG 
GCCGGCATCT CCAAGTTCAA GGGCCGCGCG CTGGTGGGCA GCGAGCTGGC CTGCGAGGCC 
ACGCTGATGT GCGCGATGCG CCAGATCAAC TGA 

 

Protein sequence

MTTTTLDIHQ ILKLLPHRYP FLLVDRVLDM EKGKRITALK NVTMNEPFFN GHFPHRPVMP 
GVLMLEAMAQ AAALLSFHSL DIVPDDNTVY YFAAIDGARF KRPVEPGDQL TLEVEIERMK 
AGISKFKGRA LVGSELACEA TLMCAMRQIN