Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2609 |
Symbol | lpxD |
ID | 7972371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2753969 |
End bp | 2754946 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644793197 |
Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
Protein accession | YP_002944500 |
Protein GI | 239815590 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGACTGC AGCTCGGAGC CATCGTCAGC GCCCTTGGGG GCGAGCTTCA CGGGGACCCG GCGCTGTCCA TCGAACGGCT TGCGCCGCTG CAGAATGCGC AGCCCGATGC GCTCAGCTTC CTGAGCCATC CCAAATACCA GCAGGAACTG GCGGCCTCCA AGGCTGCCTG CGTGATCGTC GCGCCGGCCA TGCGCGAGGC CGCGGCCTCG CGCGGGGCGT TCATCGTCGC GGCCGATCCC TACCTTTATT TCGCGCGCCT CACGCAGCTG TGGAAGGCGC ATCATGCGCG GCCCGAGGCT GACCGCATCC ATCCCTCCGC GGTGATCCAT CCCGAGGCCG TGGTGGACGC CACGGCGCGC ATCGGCGCCT TGTGCGTGGT GGAGCGGGGC GCGCGCATCG GCGCCGGCAC GGTCCTCAAG TCGCGCGTGA CGATCAGCGA AGACTGCGTG GTCGGCGAGC GCTGCCTGCT GCATCCGGGC GTGGTGATCG GCGCCGACGG CTTCGGCCTG GCGCCGCACG AAGGCGCCTG GGTCAAGATC GAGCAGCTGG GCGCGGTGCG CATCGGCAAC GACGTCGAGA TCGGCGCCAA CACCTGCATC GACCGCGGCG CGCTCGACGA CACCGTCATC GAGGACGGCG TCAAGCTCGA CAACCTGATC CAGATCGGCC ACAACGTGCG TGTCGGCAAG CACACCGCCA TGGCCGGCTG CGTTGGCGTG GCGGGCAGCG CCACCATCGG TGCGCACTGC ACCTTCGGCG GCGGTGCGAT CGTGCTCGGC CATCTCACGG TGGCCGACGG GGTGCACGTG TCCGCGGCCA CCGTGGTGAC CCGCTCGATC CGCAAGGCCG GCCAGTACAC CGGCATGTTC CCCATCGACG ACAATGCGAA CTGGGAAAAG AACGCGGCAA CGCTCAAGCA GTTGCACAGC CTGCGCGAAC GACTCAAGGC GCTCGAAAAG GCCCCTCAGA AAAAGTGA
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Protein sequence | MGLQLGAIVS ALGGELHGDP ALSIERLAPL QNAQPDALSF LSHPKYQQEL AASKAACVIV APAMREAAAS RGAFIVAADP YLYFARLTQL WKAHHARPEA DRIHPSAVIH PEAVVDATAR IGALCVVERG ARIGAGTVLK SRVTISEDCV VGERCLLHPG VVIGADGFGL APHEGAWVKI EQLGAVRIGN DVEIGANTCI DRGALDDTVI EDGVKLDNLI QIGHNVRVGK HTAMAGCVGV AGSATIGAHC TFGGGAIVLG HLTVADGVHV SAATVVTRSI RKAGQYTGMF PIDDNANWEK NAATLKQLHS LRERLKALEK APQKK
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