| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2608 |
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| Symbol | |
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| ID | 7972370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2753412 |
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| End bp | 2753954 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644793196 |
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| Product | outer membrane chaperone Skp (OmpH) |
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| Protein accession | YP_002944499 |
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| Protein GI | 239815589 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2825] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCATT TGATTCGCGC CGCCGTTGGC GCGTTGTTGG TCCCCGTTTT CGCGCTGGCT
GCGGCGCCTG CCGCCCAGGC GCAGGAAACC TTTCGCATCG GCTTCGTGAA TCCGGACCGC
GTGCTGCGCG AGGCGCAGCC GGCCAAGGTT GCGCAAGCCA AGCTCGAGGC TGAATTCCTC
AAGCGCGAAA AGGATCTCAC GGCCCAGGGC GAAGCACTGA AGACGGCCTC CGAACGGTTC
GAGCGCGAAG CGCCCACCCT GTCCGAAAGC CAGCGCACCG CGCGCCAGCG GGCGCTGGTC
GACCAGGACC GCGATTTCCA GCGCCGCCGC CGCGAGTTCC AGGAAGACCT GAACGCGCGC
AAGAACGAAG AACTCCAGCA GGTCTACGAA CGCGCCAACC GCGTCGTGAA GCAGGTGGCC
GAGGCTGAAA AGTACGACGC CATCCTGCAG GAAGCGATCT ACATCAATCC CAAGCACGAC
ATCACTGACA AGGTGATCAA GGCCCTGAAC GCCTCGACCG CTGCTCCTTC GGCCGGCAAG
TAA
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| Protein sequence | MKHLIRAAVG ALLVPVFALA AAPAAQAQET FRIGFVNPDR VLREAQPAKV AQAKLEAEFL
KREKDLTAQG EALKTASERF EREAPTLSES QRTARQRALV DQDRDFQRRR REFQEDLNAR
KNEELQQVYE RANRVVKQVA EAEKYDAILQ EAIYINPKHD ITDKVIKALN ASTAAPSAGK
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