| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2599 |
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| Symbol | rpsB |
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| ID | 7972361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2743569 |
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| End bp | 2744321 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644793187 |
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| Product | 30S ribosomal protein S2 |
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| Protein accession | YP_002944490 |
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| Protein GI | 239815580 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0052] Ribosomal protein S2 |
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| TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTACCA CCATGCGCGA AATGCTGGAA GCCGGTGTCC ACTTCGGTCA CCAAACCCGC
TTCTGGAACC CCAAGATGGC CCCGTTCATC TTCGGCCATC GCAACAAGAT TCACATCATC
AACCTGGAAA AGTCGCTCCC GATGTTCCAG GACGCGATGA AGTACGCCAA GCAGCTCACC
GCCAACCGCG GCACGATCCT GATGGTCGGC ACCAAGCGCC AGGCCCGTGA AATCGTGGCT
GCCGAAGCCC GCCGCGCCGG CGTGCCTTTC GTCGACACCC GCTGGCTCGG CGGCATGCTG
ACCAACTTCA AGACGGTCAA GACCTCGATC AAGCGCCTGA AGGACATGAA GGCCCAGCAG
GAAGCCGGCC TCGACAGCCT GAGCAAGAAA GAGCAGCTCA CCTTCACCCG TGAAATCGAG
AAGCTCGAGA AAGACATCGG CGGCATCCAG GACATGACCG CGCTGCCCGA CGCCATCTTC
GTGATCGACG TGGGCTTCCA CAAGATCGCC GTGGCCGAAG CCAAGAAGCT GGGCATCCCG
CTGATCGGCG TGGTCGACTC CAACCACTCG CCCGAAGGCA TCGACTACGT GATCCCGGGC
AACGACGACT CGTCGAAGGC CGTCACGCTC TACGCCCGCG GCATCGCCGA CGCGATCATC
GAAGGCCGCA ACAGCGCCAC CGGCGACGTG GTCAAGGCCA TTGCCGAAGG CAGCGATGAA
TTCGTCGAAG TCGAAGAGGG CGCCTCGGCC TGA
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| Protein sequence | MSTTMREMLE AGVHFGHQTR FWNPKMAPFI FGHRNKIHII NLEKSLPMFQ DAMKYAKQLT
ANRGTILMVG TKRQAREIVA AEARRAGVPF VDTRWLGGML TNFKTVKTSI KRLKDMKAQQ
EAGLDSLSKK EQLTFTREIE KLEKDIGGIQ DMTALPDAIF VIDVGFHKIA VAEAKKLGIP
LIGVVDSNHS PEGIDYVIPG NDDSSKAVTL YARGIADAII EGRNSATGDV VKAIAEGSDE
FVEVEEGASA
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