| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2598 |
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| Symbol | |
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| ID | 7972360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2742020 |
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| End bp | 2743345 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644793186 |
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| Product | amidase |
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| Protein accession | YP_002944489 |
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| Protein GI | 239815579 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGACC TCCACGCCAC CCGTCTGAAT CTTCTGGCAG GTGGCACCGA TGCATGCACC
GAAACGGAGC GCGCCATCGG CATCGCCCAG TCCCCGGCCT GCCGCCACGT GTTCACCCGC
ACGCTGTTCG ACGAAGCCCG CCGGCAGGTC GCCGGTTCGG CGCCGCAAAG CCGGCTCGCC
GGGCTCGCCT TCACCGCCAA GGACCTGTTC GACATCGAGG GGCAGCCGAC CCCGGCGGGC
TCCATGGTGC TCTCGCATGC GCCGGCCGCC AAGGCCGATG CCGTGGCTGT GGCGCGACTG
CGCGCCGCGG GCGGCGTGCT GGCGGGCCGC ACCAACATGA CGGAATTCGC CTTTTCCGGC
GTGGGCGTCA ACCCGCACCA CGGCACGCCG GCCAACGCCA GCGATGCGAC CACGCCGCGC
ATCCCGGGCG GTTCGTCCTC CGGCGCCGCC GTGTCGGTCG CCACCGGGGC GGCCTTCATC
GGCCTGGGCT CCGACACCGG CGGCTCGATC CGCATTCCGG CCGCGCTGAA CGGGATCGTG
GGTTTCAAGA GCACCGCCCG GCTGGTGCCG GCCCAGGGCG CGCTGCCGCT GTCGACCACG
CTCGACACCG TCTGCGCCAT GACGCGCTCG GTGCGGGATG CCATCACCGC GCATGAAGTC
CTCGCGGCAC GCCGCGTGAC CGCCGGTGCG GCCTTGCTGG GCGCATACCG GCTTGCCGTC
GTGAAGAACG TGTTCCTGGA CGGCATCGAG CCCGCGGTGG CCCGCGCCTT CGAAGATGCG
CTGCAAACAC TGCGCGATGG CGGTGCCCGG ATCGAGGAAA TCGAGCTGCC GGAACTCGCG
CAGTTGCAGG CCATCAACGC CACGGGCGGT TTCTCGGCGG CCGAGTCCTA CGCCTGGCAC
CGGCTGCTGC TCGAGCGCAG CGGCGCCGGC TACGATCCTC GCGTGGTGCA GCGCATCCTC
AAGGGTGCCA CCATGAAGGC GCACGAATAC ATCGATCTCG TGCACGCCCG CCATGACTGG
ATCACCCGCG TCGAGGCGGC GCTGTCGCCC TTCGATGCGG TGCTGTCGCC CACCGTGCCG
ATCACCGCGC CCGCCATTGC GAGCGTTGCG CCGGGCGCCG AGCGCGACGA CGAATTCTTC
CGCATCAATG CGCTCTTGCT GCGCAACCCG TCGATCGTCA ACATGCTCGA CGGCTGCGCC
ATCTCGCTGC CCTGCCATGC CGCCGGCGAA CTGCCGGTGG GCCTGATGCT GTGGCATGCC
GCGCTGCATG ACGACGCCGT CCTGGCGGTC GCCCTGCAAG CAGAAAAAGC GCTGCAAAAA
CAATAG
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| Protein sequence | MNDLHATRLN LLAGGTDACT ETERAIGIAQ SPACRHVFTR TLFDEARRQV AGSAPQSRLA
GLAFTAKDLF DIEGQPTPAG SMVLSHAPAA KADAVAVARL RAAGGVLAGR TNMTEFAFSG
VGVNPHHGTP ANASDATTPR IPGGSSSGAA VSVATGAAFI GLGSDTGGSI RIPAALNGIV
GFKSTARLVP AQGALPLSTT LDTVCAMTRS VRDAITAHEV LAARRVTAGA ALLGAYRLAV
VKNVFLDGIE PAVARAFEDA LQTLRDGGAR IEEIELPELA QLQAINATGG FSAAESYAWH
RLLLERSGAG YDPRVVQRIL KGATMKAHEY IDLVHARHDW ITRVEAALSP FDAVLSPTVP
ITAPAIASVA PGAERDDEFF RINALLLRNP SIVNMLDGCA ISLPCHAAGE LPVGLMLWHA
ALHDDAVLAV ALQAEKALQK Q
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