Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2585 |
Symbol | |
ID | 7970062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 2727169 |
End bp | 2727939 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644793172 |
Product | 3-hydroxybutyrate dehydrogenase |
Protein accession | YP_002944477 |
Protein GI | 239815567 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0102816 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCAAAC GCAAAACCGC GCTTGTCACG GGGTCCACCA GCGGCATTGG CTTGGCCATT GCCAAGTCGC TTGCACAACA AGGCGCAAAC ATCGTGCTCA ACGGTTTCGG CGACGCCGAA ACCCCCAAGT CCCAGATCGA GGCGCTCGGC GTGCGCGCCG AATACCACGG CGCCGACATG AGCCAGCCCG CTCAGATCGA GGACATGATG AAGTTCGCCG CGTCCAGATT CGGGCGCGTC GACATCCTCG TGAACAACGC CGGCATCCAG CACGTGGCAA AGGTCGAGGA CTTCCCGCCG GAACGCTGGG ACGCCATCAT CGCCATCAAC CTCACGAGCG CATTCCACAC GACCCGGCTC GCCATACCCG CGATGCGCGA GGCCAACTGG GGCCGCATCA TCAACGTGGC ATCGGCCCAC GGCCTGGTGG CCTCGGCGCA GAAGTCGGCC TACGTGGCGG CCAAGCACGG CATCGTGGGC TTCACCAAGT CGGTGGCGCT CGAAACCGCA ACCACCGGCA TCACGAGCAA TGCAATCTGC CCAGGCTGGG TGCTGACGCA GCTGGTGCAA AAGCAGATCG ACGACCGCGC GGCGCGCGAA GGCATCTCGG CCACGCAGGC GCAGAACGAG CTGCTCGGGG AAAAGCAGCC TTCGCTGCAG TTCACCACGG TCGAGCAGCT CGGCGGCCTG GCGGTGTTCC TGTGCTCGCC GGCCGCCGAC CAGGTGCGCG GCGTCGCCTG GCAGATGGAC GGCGGCTGGA CCGCTCAATA A
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Protein sequence | MLKRKTALVT GSTSGIGLAI AKSLAQQGAN IVLNGFGDAE TPKSQIEALG VRAEYHGADM SQPAQIEDMM KFAASRFGRV DILVNNAGIQ HVAKVEDFPP ERWDAIIAIN LTSAFHTTRL AIPAMREANW GRIINVASAH GLVASAQKSA YVAAKHGIVG FTKSVALETA TTGITSNAIC PGWVLTQLVQ KQIDDRAARE GISATQAQNE LLGEKQPSLQ FTTVEQLGGL AVFLCSPAAD QVRGVAWQMD GGWTAQ
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