Gene Vapar_2582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2582 
SymbolompR 
ID7970059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp2725127 
End bp2725858 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content68% 
IMG OID644793169 
Productosmolarity response regulator 
Protein accessionYP_002944474 
Protein GI239815564 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.121294 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCAAG TTCCCGCCCG CACTGACAAG ATCGTGATCG TCGACGACGA CGCCCGCATC 
CGCGACCTGC TTCGCCGCTA CCTGACCCAG GAAGGTTTCG AAGTGATCGT GGCCGAGGAC
GGCAAGGCGC TCAACCGCAT CCTGTTGCGC GACACGGTCG ACCTGATCGT GCTCGACCTG
ATGATGCCCG GCGAAGACGG CCTGTCGGTC TGCCGCCGCC TGCGTGCCGC CAACGACCGC
ACGCCGATCA TCATGCTCAC CGCCAAGGGC GAGGACGTCG ACCGCATCGT CGGCCTCGAG
GTCGGCGCGG ACGACTACCT GGGCAAGCCG TTCAACCCCC GCGAACTGCT GGCGCGCGTG
CATGCGGTGC TGCGCCGCCG TCCGCCACTC GAAGCGCCCG GCGCCCCTTC CACCGAGAAC
GAGACCGTCA CCTTCGGGCC CTTTGCCTTC GACCTGGGTT CGCGCACGCT CAAGAAGGAC
GGCGAGGAAC TCTCCCTGAC CACCGGCGAA TTCGCGATGC TGAAGGCGCT GGTGCGCCAT
CCACGCCAGC CGCTGTCGCG CGAGAAGCTG GCCCAACTGG CCCGCGGCCG CGAGTTCGAG
CCCTTCGACC GCAGCCTCGA CGTGCAGATC TCGCGCCTGC GCAAGCTGGT CGAGGCCGAT
GCGGCGGCGC CCCGCTACAT CCAGACCGTG TGGGGCGTGG GCTACGTGTT CGTGCCGGAC
GGCACGGCCT GA
 
Protein sequence
MTQVPARTDK IVIVDDDARI RDLLRRYLTQ EGFEVIVAED GKALNRILLR DTVDLIVLDL 
MMPGEDGLSV CRRLRAANDR TPIIMLTAKG EDVDRIVGLE VGADDYLGKP FNPRELLARV
HAVLRRRPPL EAPGAPSTEN ETVTFGPFAF DLGSRTLKKD GEELSLTTGE FAMLKALVRH
PRQPLSREKL AQLARGREFE PFDRSLDVQI SRLRKLVEAD AAAPRYIQTV WGVGYVFVPD
GTA