| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2579 |
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| Symbol | |
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| ID | 7970056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2722413 |
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| End bp | 2723138 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644793166 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_002944471 |
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| Protein GI | 239815561 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.317508 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCCGCACC CCATGTCTTC TTCCCGATTT TTCGTGCTGA TTCCCTGCGC CGGCTTCGGC
CACCGTGCAG GTGGCGCCCA GCCCAAGCAA TACCAGCGGC TGGCGGGATC GTCGATGGTG
GCCCACACGG TGGCTGCGTT CCGCGCGCTG GCGGGGCGCT TTGCCGGGCT GGCGGTGGTG
GTGTCGCCGG ACGACCGCGA GGTGCAGACG GCGCTGCCGC GCTTTCCGGC CGACAACGAA
TTCCTGCTGC GCGTGGGGGG CGTCACGCGC GCCGCCACGG TGCGCAACGG TCTCGCGGCG
CTGCGCCAGA AGGGTGCCGG GGCGCATGAC TGGGTGCTGG TGCACGATGC GGCGCGCTGC
CTCGTCACCT CGAGCCAGAT CGAGGCGCTG ATCGCGGCCT GCGAGCACGA CGCCGTCGGC
GGGCTGCTGG CGCAGCGGCT GGCCGACACG CTGAAGGCCT CCTCGGCCGA CAGCCGCGTC
TCCCAGACTC TTTCGCGGGC CGACAAGTGG CTGGCCCAGA CGCCGCAGAT GTTCCGCATC
GGCATGCTGC TCGATGCGCT GGAGCGGGCG GGCGACGCGG TGACCGACGA GGCCGGCGCC
ATCGAGGCCA TCGGCCTGTC GCCCTTGCTG GTGCCGGGCA GCGCGCAGAA CTTCAAGGTG
ACCTTTCCCG AGGACTTCGC CCTGGCCGAG GCGGTGCTGC TCGGCCGCCG AAAGGCCATC
GCATGA
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| Protein sequence | MPHPMSSSRF FVLIPCAGFG HRAGGAQPKQ YQRLAGSSMV AHTVAAFRAL AGRFAGLAVV
VSPDDREVQT ALPRFPADNE FLLRVGGVTR AATVRNGLAA LRQKGAGAHD WVLVHDAARC
LVTSSQIEAL IAACEHDAVG GLLAQRLADT LKASSADSRV SQTLSRADKW LAQTPQMFRI
GMLLDALERA GDAVTDEAGA IEAIGLSPLL VPGSAQNFKV TFPEDFALAE AVLLGRRKAI
A
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