| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2561 |
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| Symbol | |
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| ID | 7970038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2701227 |
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| End bp | 2702108 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644793148 |
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| Product | Alpha/beta hydrolase fold-3 domain protein |
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| Protein accession | YP_002944453 |
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| Protein GI | 239815543 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0657] Esterase/lipase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.103061 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACCGC GCCCATCGTC CCGCTCTGCC GAAGCCGCTG CTCTCGCCGC GGCGCAAGGC
GTGGAAGCCG ATCTGTCGAT CGAGCTGCCC GGCCGCGAGC CCGTGGGCGC CCGGGTCTAC
GGACAGCGCC CGCGCGGCGA GACGGTGCCG CTGGTGCTGC ACTTCCATGG CGGCACCTTC
ATCTGCGGCA ACCTGGACAA CGGGCGCAAC GTGGCCCGGC TGCTGGCCGG CGCGGGCGCG
GTGGTGGTGT CGGTGGACTA TCCGCTGGCG CCCGAGTCGC CTTTCCCCGA GCCCATCGAA
GTGGGCTATG CCGCGCTCGA ATGGCTCTAC AAGCAGCGCG TGAAGCTCGG CGGCAAGGGC
GCCCAGGTGT ACCTGGCCGG CGAAGAGGCC GGCGGCAACC TGGCCGCCGG GGTGGCGCTG
ATCGCCCGCG ACCGGGCGCA TCCGCCGCTG GCCGGGCAGA TCCTGCTGTC GCCCATGCTC
GACCCGTGCG CGGGCACCGC GTCGCTGCGC AAGGCCACCA ACGACTCGGC CGAATGCCGC
TGGGCCACGG GCTGGGAAAA GTACCTGAGC TGCCCGTCGA ACGCGATGCA CCCGTATGCG
GTGCCGAGCG GGTCGCTGCG GCTGTCGTCC CTGGCGCCGG CCCTGGTGCT GGTGGGCCCC
GACGACGCCA TGCGCGACGA GGCAATGACC TTTGCCGGGC GCCTGCGCGC GGCCGGCATC
GACGTCACCA GCAGCGTGCT GCCCGGCGCC GCCAACTGGC CCAGGGCGCT GTACGACCCC
GAGCCCTCGG GCTGCAAGGC CTGCGAAGCC AGCGTGCAGC AGCACTTCCG CGAATTTTTC
AGTGCCACCA CGCCGCCCCC GGTAGCACCC AAGCCCAGCT AG
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| Protein sequence | MSPRPSSRSA EAAALAAAQG VEADLSIELP GREPVGARVY GQRPRGETVP LVLHFHGGTF
ICGNLDNGRN VARLLAGAGA VVVSVDYPLA PESPFPEPIE VGYAALEWLY KQRVKLGGKG
AQVYLAGEEA GGNLAAGVAL IARDRAHPPL AGQILLSPML DPCAGTASLR KATNDSAECR
WATGWEKYLS CPSNAMHPYA VPSGSLRLSS LAPALVLVGP DDAMRDEAMT FAGRLRAAGI
DVTSSVLPGA ANWPRALYDP EPSGCKACEA SVQQHFREFF SATTPPPVAP KPS
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