Gene Vapar_2553 details

Gene Information

• Locus tag: Vapar_2553
• ID: 7970030
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 2695241
• End bp: 2695810
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 644793140
• Product: cob(I)alamin adenosyltransferase
• Protein accession: YP_002944445
• Protein GI: 239815535
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG2109] ATP:corrinoid adenosyltransferase
• TIGRFAM ID: [TIGR00708] cob(I)alamin adenosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.22582
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAATCG AAACTCCCCC CAGCGAGAAG CCGTACGACA AGGCCGAAGG CGAACGCCGC 
GGCATCGTCA TCGTCAACAC CGGCGACGGC AAGGGCAAGA GCACCGCGGC CTTCGGCCTC 
GCGCTGCGCG CGCACGGCCG CGGCAAGGCG GTGAAGATCT ACCAGTTCAT GAAGGTGCCT 
TCGGCGCGCT TCGGCGAGCA CCGCATGTTC GAGCAGATCG GCATTCCGAT CGAGGGGCTG 
GGCGACGGCT TCAGCTGGAA GAGCCAGGAC CTCGAACACT CGGCCCAGCT CGCGCGCGAT 
GGCTGGGAGA AAGCCAGGGC GGCCATTCTT TCGGGCGAGT TCTTCCTGGT GGTGCTCGAC 
GAGATCACCT ATCCGCTGAT CTACGGCTGG CTGCCGCTCG AGGGCGTGCT CGAAACGCTG 
CGCACGCGGC CCAAGCACGT GCACGTGGTG CTCACGGGCC GGCGCTGCCC GCCCGAAATC 
GTCGAGCTGG CCGACACCGT GACCGAGATG GCCATGGTCA AGCACGCATT CAAGGCCGGC 
ATTCCGGCGC AGCGCGGCAT CGAGGACTGA 

 

Protein sequence

MQIETPPSEK PYDKAEGERR GIVIVNTGDG KGKSTAAFGL ALRAHGRGKA VKIYQFMKVP 
SARFGEHRMF EQIGIPIEGL GDGFSWKSQD LEHSAQLARD GWEKARAAIL SGEFFLVVLD 
EITYPLIYGW LPLEGVLETL RTRPKHVHVV LTGRRCPPEI VELADTVTEM AMVKHAFKAG 
IPAQRGIED