| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2541 |
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| Symbol | |
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| ID | 7970018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2683851 |
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| End bp | 2684903 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644793128 |
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| Product | Nitrilase |
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| Protein accession | YP_002944433 |
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| Protein GI | 239815523 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0388] Predicted amidohydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.628575 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGCCA CCGTTCACCC CAAGCTCCGC GTTGCCGCCG TGCAGGCAGC GCCCGTGTTC
CTCGATCTCG ACGGCACCAT CGACAAGACC ATCGACCTCA TGGCCCAGGC CGCCGGCCAG
GGCGTGAAGC TCATCGCCTT TCCCGAGACC TGGGTGCCCG GCTACCCGTG GTGGATCTGG
CTCGACTCGC CGGCCTGGGG CATGCAGTTC GTGCAGCGCT ACCACGACAA CGCACTGGTC
GTGGGCTCGG CCGAATTCGA CCGCGTCCGG GAGGCCGCGC GCAAGCACAA CATCTGGGTT
TCGCTCGGCT ACAGCGAAAA GGCCGCCGGC AGCCTCTACA TTGCGCAGGC GCTGATCGAC
GACCAGGGCC GCACGGTGCA GACGCGCCGC AAGCTCAAGC CCACGCATGT GGAGCGCACC
GTGTTCGGCG AGGGCGACGG CTCGGACCTG GCCGTGGTCG AAACGCCCAT CGGCAACATC
GGATCGCTCT CGTGCTGGGA GCATCTTCAG CCGCTCAGCA AGTACGCGAT GTATGCGCAG
AACGAGCAGA TCCACTGCGG CGCCTGGCCG AGCTTTTCGC TCTATCGCGG CGCGGCCTAT
GCGCTCGGCC CCGAACTCAA CAACGCCGCG AGCCAGGTGT ACGCGGCCGA GGGCCAGTGC
TTCGTGATTG CGCCGTGCGC CACGGTTTCG CAGTCCATGA GCGAGCTGAT GTGCACCGAC
GCCGGCAAGC AGCAGATGCT GCGCGTGGGC GGCGGCTTTG CGCGCATCTA TGCGCCCGAC
GGTTCGCCGC TGGGCACGCC GCTGGCCGAA GACCAGGAGG GGCTGGTGAT TGCGGACATC
GACCTGGGGA TGATCGCGCT CTCCAAGGCG GCCGCCGACC CGAGCGGCCA CTACTCGCGG
CCCGACGTCA CGCAGTTGCT GTTGAACAAG ACGCGCCGCG AACCCGTGGT GCTGCAGCGT
GCGCCCGAGG TCGAGCGCGG TGCCTTCGAG GCCATCGTCG CCGCACCCGA GCCGGCACCG
GCGGCCGCGC GCCAGCAGCC GCTGGCGGCC TGA
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| Protein sequence | MPATVHPKLR VAAVQAAPVF LDLDGTIDKT IDLMAQAAGQ GVKLIAFPET WVPGYPWWIW
LDSPAWGMQF VQRYHDNALV VGSAEFDRVR EAARKHNIWV SLGYSEKAAG SLYIAQALID
DQGRTVQTRR KLKPTHVERT VFGEGDGSDL AVVETPIGNI GSLSCWEHLQ PLSKYAMYAQ
NEQIHCGAWP SFSLYRGAAY ALGPELNNAA SQVYAAEGQC FVIAPCATVS QSMSELMCTD
AGKQQMLRVG GGFARIYAPD GSPLGTPLAE DQEGLVIADI DLGMIALSKA AADPSGHYSR
PDVTQLLLNK TRREPVVLQR APEVERGAFE AIVAAPEPAP AAARQQPLAA
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