Gene Vapar_2540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2540 
Symbol 
ID7970017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp2682772 
End bp2683833 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content69% 
IMG OID644793127 
ProductPhenylacetaldoxime dehydratase 
Protein accessionYP_002944432 
Protein GI239815522 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATCCG CCATTGCCGA GCACCTGAAG TGCCCCCGCA CGCGCCATCG CCGCGTGGAG 
GACGACTACG CGCCGCCCTA CCCCGCCTGG TCGGCGCGCG CGCCGGGCGC GGTCAGGCAG
GTCGTGATGG GCTACTTCGG CGTGCAGTCG CGCGGCGCCG GGATGCAGGG CCGCGCGTGT
GCGGCGCTGA TGAAGATCGC CGCCGGCTTT GCGCTGCCCG ACGGGCCCGG CCACCACGAC
TTCGCGCACC ATGTCGACGC CGCCGGCTGC GACAACATGG TCGCCATCGC CTACTGGAAC
GACCCTGCGG CCCATGCGCG CTGGTGCACG GCGCCCGAGG TCGATGCCTG GTGGCGCTCC
GACGAGCGGC TGGCGGACGG CCTCGGCTAC TTCCGCGAAA TCGTTGCGCC GCGCGCCGAG
CACTTCGAGA CCATGTTCAA CACGCCCGAC CGCCTCGAAG GCGTGGGCGT GGTGATGGGC
GGCGTGAGCG GCGAACTGCA GGAGCACGGC TACTGGGGTT CGATGCGCGA CCGCATTCCG
CTGTCACAGA CCGACGCCAT GGCGCCCTCG GGCACGCGCG CCGTCATTGC CGGCGCGCCG
GCACCCGGCC AGCGCGTGCG CATCGCAGGC CACGAGAACA TCGCCATGAT CCGCTCCGGC
CAGGAGTGGG CCGACACCAC GGGACAGGAA CGCGCGCTCT ATCTCGGCGA GATGGAACCC
GTGCTGCGCG AAGGCATGGA CTTCCTGCGC GACCAGGGGC TTCACATCGG CTGCTACAGC
AACCGCTACA TGCAGCACCT CGATGCCAAG GGGGCGCCGC TGGAGAAATC CTTCGGCCTG
AGCTTCTGGC ACTCGCTCGC CGACATGGAG CGCTGGGCCG AGTCGCATCC CACGCACGTC
GCGATCTTCG GCAGCTTCAT GCGCTACGTG CAGGCACTGA ACTTCCAGCT GCAGCTGCGC
GTGTACCACG AGGTGTCGGT GCTGAAGGCC GACGAACAGA GCTACGAATA CATCAACTGC
CATGCGGGCA GCGGGCTCAT GAACGGGCTG GGCGAGGTGT AG
 
Protein sequence
MESAIAEHLK CPRTRHRRVE DDYAPPYPAW SARAPGAVRQ VVMGYFGVQS RGAGMQGRAC 
AALMKIAAGF ALPDGPGHHD FAHHVDAAGC DNMVAIAYWN DPAAHARWCT APEVDAWWRS
DERLADGLGY FREIVAPRAE HFETMFNTPD RLEGVGVVMG GVSGELQEHG YWGSMRDRIP
LSQTDAMAPS GTRAVIAGAP APGQRVRIAG HENIAMIRSG QEWADTTGQE RALYLGEMEP
VLREGMDFLR DQGLHIGCYS NRYMQHLDAK GAPLEKSFGL SFWHSLADME RWAESHPTHV
AIFGSFMRYV QALNFQLQLR VYHEVSVLKA DEQSYEYINC HAGSGLMNGL GEV