Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2540 |
Symbol | |
ID | 7970017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 2682772 |
End bp | 2683833 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644793127 |
Product | Phenylacetaldoxime dehydratase |
Protein accession | YP_002944432 |
Protein GI | 239815522 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAATCCG CCATTGCCGA GCACCTGAAG TGCCCCCGCA CGCGCCATCG CCGCGTGGAG GACGACTACG CGCCGCCCTA CCCCGCCTGG TCGGCGCGCG CGCCGGGCGC GGTCAGGCAG GTCGTGATGG GCTACTTCGG CGTGCAGTCG CGCGGCGCCG GGATGCAGGG CCGCGCGTGT GCGGCGCTGA TGAAGATCGC CGCCGGCTTT GCGCTGCCCG ACGGGCCCGG CCACCACGAC TTCGCGCACC ATGTCGACGC CGCCGGCTGC GACAACATGG TCGCCATCGC CTACTGGAAC GACCCTGCGG CCCATGCGCG CTGGTGCACG GCGCCCGAGG TCGATGCCTG GTGGCGCTCC GACGAGCGGC TGGCGGACGG CCTCGGCTAC TTCCGCGAAA TCGTTGCGCC GCGCGCCGAG CACTTCGAGA CCATGTTCAA CACGCCCGAC CGCCTCGAAG GCGTGGGCGT GGTGATGGGC GGCGTGAGCG GCGAACTGCA GGAGCACGGC TACTGGGGTT CGATGCGCGA CCGCATTCCG CTGTCACAGA CCGACGCCAT GGCGCCCTCG GGCACGCGCG CCGTCATTGC CGGCGCGCCG GCACCCGGCC AGCGCGTGCG CATCGCAGGC CACGAGAACA TCGCCATGAT CCGCTCCGGC CAGGAGTGGG CCGACACCAC GGGACAGGAA CGCGCGCTCT ATCTCGGCGA GATGGAACCC GTGCTGCGCG AAGGCATGGA CTTCCTGCGC GACCAGGGGC TTCACATCGG CTGCTACAGC AACCGCTACA TGCAGCACCT CGATGCCAAG GGGGCGCCGC TGGAGAAATC CTTCGGCCTG AGCTTCTGGC ACTCGCTCGC CGACATGGAG CGCTGGGCCG AGTCGCATCC CACGCACGTC GCGATCTTCG GCAGCTTCAT GCGCTACGTG CAGGCACTGA ACTTCCAGCT GCAGCTGCGC GTGTACCACG AGGTGTCGGT GCTGAAGGCC GACGAACAGA GCTACGAATA CATCAACTGC CATGCGGGCA GCGGGCTCAT GAACGGGCTG GGCGAGGTGT AG
|
Protein sequence | MESAIAEHLK CPRTRHRRVE DDYAPPYPAW SARAPGAVRQ VVMGYFGVQS RGAGMQGRAC AALMKIAAGF ALPDGPGHHD FAHHVDAAGC DNMVAIAYWN DPAAHARWCT APEVDAWWRS DERLADGLGY FREIVAPRAE HFETMFNTPD RLEGVGVVMG GVSGELQEHG YWGSMRDRIP LSQTDAMAPS GTRAVIAGAP APGQRVRIAG HENIAMIRSG QEWADTTGQE RALYLGEMEP VLREGMDFLR DQGLHIGCYS NRYMQHLDAK GAPLEKSFGL SFWHSLADME RWAESHPTHV AIFGSFMRYV QALNFQLQLR VYHEVSVLKA DEQSYEYINC HAGSGLMNGL GEV
|
| |