Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2538 |
Symbol | |
ID | 7970015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2679472 |
End bp | 2681007 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644793125 |
Product | malonyl-CoA synthase |
Protein accession | YP_002944430 |
Protein GI | 239815520 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGACGA AAGCCAATTC CAACCTGTTC GCCGCCCTGC GCGCGGCCTT TCCCGCCGAG CTCGGCCGCA CGGCCGTGGA AACCGACAAC GGCCTGTTCT ATTCGTGGCA GGACCTCGAC CGCGCCAGCG CGATGATGGC CAACCTGTTC GGCGCGCTGG GGCTCGCGGA GGGCGCCCGC ATCGCGGTGC AGGTCGAGAA ATCGGTCGAG GCGATGATCC TCTACCTCGC CACGCTGCGC GCCGGCTACG TGTTCCTGCC GCTCAACACC GCCTACCAGA GCGCCGAGAT CGAATACTTC ATCGGCAACG CCGAGCCGGC CGTGGTGGTG TGCACCAGCC GCAATGCCGC GTGGGTCGGA CCCATCGCGA GCGCGGCGGG CACCCGGCAT GTGTTCACGC TGGACGACGA CCGCACCGGC ACGCTGCTGG AGCTTGCCGC GCAATGCAGC GACCGGCATG AAGCGGCGCG CAAGAACGCG GACGACCTGG CCGCCATCCT CTACACCAGC GGCACCACCG GCCGCAGCAA GGGCGCGATG CTCACGCATG GCAACCTGCT GTCGAACGCC GAGGTGCTCA AGGACTACTG GGGCTGGACG GAGGGCGACG TGCTGATCCA CGCGCTGCCG ATCTTCCATG TGCACGGCCT CTTCGTTGCG CTCCACGGTG CGCTGCTCAA CGGCAGCAAG ATGATCTGGT TCTCCAGGTT CGACCCGAAG CGCGCGGTCG AGAAGCTGCC CGAGGCCACC GTGTTCATGG GCGTGCCCAC GCTCTATGTG CGCCTGCTGG CCGAGCCCGG CCTCACGCGC GAGGCGGTGC GCGGCATGCG GCTCTTCATC GCCGGTTCCG CGCCGCTGCT CATCGAGACC TTCGAGGAAT GGCGCGAGCG CACCGGCCAC ACCATCCTGG AGCGCTACGG CATGAGCGAA ACCATCATGC TCACCTCCAA CCCCTACAGC CCCACACAGG GCGAGCGCCG CGGCGGCACC GTCGGCTTTG CGCTGCCGGG CGTGCGGCTG CGCGTGCGCG ACGACGCCGG CCGCGACTGC ACCACCGACG AGATCGGCAA CATCCAGGTC AGCGGCCCGA ACGTGTTCGC GGGCTACTGG CGCATGCCGG AGAAGACGAA GGAAGAATTC ACCGCCGATG GTTTCTTCAA GACCGGCGAC GTCGGCAAGA TCGACGGCCG CGGCTACGTC ACCATCGTCG GACGCAGCAA GGACCTGATC ATCAGCGGCG GCTACAACGT CTATCCCGCC GAGATCGAGG GCTACATCAA CGAGCTGCCG GGCGTGGCCG AAAGCGCGGT GGTCGGCGTG CCCCACCCCG ACTTCGGCGA GGTGGGCGTG GCCATCGTCA TTGCCAAGGG CAATGGGGCG CTCGACCCCG ATGCCATCGT GGCGGAGCTC AAGTCGAAGC TCGCGAACTT CAAGATTCCC AAGCGCTGCT TCGTCGTGCC CGAGCTGCCG CGCAACACCA TGGGCAAGGT GCAGAAGGCG CTGCTGCGGG AGCAGCACAA GGGGTTGTTC GGCTAG
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Protein sequence | MKTKANSNLF AALRAAFPAE LGRTAVETDN GLFYSWQDLD RASAMMANLF GALGLAEGAR IAVQVEKSVE AMILYLATLR AGYVFLPLNT AYQSAEIEYF IGNAEPAVVV CTSRNAAWVG PIASAAGTRH VFTLDDDRTG TLLELAAQCS DRHEAARKNA DDLAAILYTS GTTGRSKGAM LTHGNLLSNA EVLKDYWGWT EGDVLIHALP IFHVHGLFVA LHGALLNGSK MIWFSRFDPK RAVEKLPEAT VFMGVPTLYV RLLAEPGLTR EAVRGMRLFI AGSAPLLIET FEEWRERTGH TILERYGMSE TIMLTSNPYS PTQGERRGGT VGFALPGVRL RVRDDAGRDC TTDEIGNIQV SGPNVFAGYW RMPEKTKEEF TADGFFKTGD VGKIDGRGYV TIVGRSKDLI ISGGYNVYPA EIEGYINELP GVAESAVVGV PHPDFGEVGV AIVIAKGNGA LDPDAIVAEL KSKLANFKIP KRCFVVPELP RNTMGKVQKA LLREQHKGLF G
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