| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2528 |
|---|
| Symbol | |
|---|
| ID | 7970005 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | - |
|---|
| Start bp | 2669813 |
|---|
| End bp | 2670118 |
|---|
| Gene Length | 306 bp |
|---|
| Protein Length | 101 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644793115 |
|---|
| Product | cytochrome c class I |
|---|
| Protein accession | YP_002944420 |
|---|
| Protein GI | 239815510 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4654] Cytochrome c551/c552 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAC TCCTGTCATT CGCGGTTCTC GGCCTCGGCC TGGCGGCGCC CGCCTTTGCC
GACCTGGCGT TGGCGACGTC GAAGAACTGC ATGAGCTGCC ACGCGGTGGA CCGCAAGGTG
CTCGGCCCCG CCTTCAAGGA CGTGGCCGCC AAGTACAAGG GCAACGCCGG TGCCGTCGAC
ATGCTGGCGG CAAAGATCAT CAAGGGCGGC TCGGGCGTGT GGGGGCCGTT GGCGATGCCG
GCCAACACCC AGGTGAGCGA AGCCGACGCC AAGAAGCTCG CGGCCTGGGT GCTGCTGGCG
CGCTGA
|
|---|
| Protein sequence | MKRLLSFAVL GLGLAAPAFA DLALATSKNC MSCHAVDRKV LGPAFKDVAA KYKGNAGAVD
MLAAKIIKGG SGVWGPLAMP ANTQVSEADA KKLAAWVLLA R
|
|---|
| |