| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2524 |
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| Symbol | |
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| ID | 7970001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2665451 |
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| End bp | 2666413 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644793111 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002944416 |
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| Protein GI | 239815506 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCGAT TGAATGCAAT GCGCGTGTTC GTCACCGTGG TGGATTCGGG CAGCCTTTCG
GCCGCGGCCG ACAAGCTCGA CCTCTCGCGC CCGGTGGTCA CGCGCTACGT GGCCGAACTC
GAGCAATGGA CGGGTGCGCG CCTCTTGCAC CGCACGACGC GCCGGCTGAG CCTCACGGCG
GCGGGCGAGG AACTGCTGCC GCGCTGCCGC CAGGTGCTCG AGCTCGCGGG CGACATGCAG
GAGGCCGTGC GGCAGCCGGC CGAGGCGCCG CGCGGCCAGC TGCGCATCAC GGCCAGCACC
TCGTTCGCAC AGGCGCAGCT GGCCGATGCC GTGGCCGACT ACGTGCGGCT CCATCCCGGC
GTGGCGGTCG ACCTGGTGCT GCTGGACCGG GCGGTGAACC TGGTGGACGA GCGCATCGAC
CTGGCGATCC GCGTGGCGGT GGAGATCGAT CCCAACCTGA TTGCGCGGCG GCTCACCGAT
TGCCGCTCGG TGGTGTGCGC ATCACCCGGC TACCTGAAGG AGCACGGGCA GCCGCTGCGC
GTGGAGGAGC TGGCCCAGCG CAACTGCCTC ACGCACTCGT ACTTCGGGCG CAGCCTCTGG
AATTTCACGC GCAGGGAAGA CGGCACGCCC GTGTCGGTGG CCGTGGGCGG CAACGTGTCG
ACCAACGATG CCGCGAGCCT GATGCACCTG GCGCGGGCCG GGGCCGGCAT CGCGATGCTG
CCGACCTACC TGACCGCCGG CCTGCTGCAG GCCGGCGAAC TGGTGCGGCT GTTCCCGGAG
TTCGAGCCGC AGGTGGTCGG CATGTATGCG GTGTATGCCT CGCGCAAGCA CATGCCGGCC
ACGCTGCGCA CAATGCTCGA CTTTCTTGCC AGGCGTTTTA CCGGCGTGCC CGCCTGGGAC
CTGCCGCAGG CAGGCCCGGC GCTCAGTGCG AACCGCCGCC CTGCGGCACG GCGGGCGCCA
TGA
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| Protein sequence | MDRLNAMRVF VTVVDSGSLS AAADKLDLSR PVVTRYVAEL EQWTGARLLH RTTRRLSLTA
AGEELLPRCR QVLELAGDMQ EAVRQPAEAP RGQLRITAST SFAQAQLADA VADYVRLHPG
VAVDLVLLDR AVNLVDERID LAIRVAVEID PNLIARRLTD CRSVVCASPG YLKEHGQPLR
VEELAQRNCL THSYFGRSLW NFTRREDGTP VSVAVGGNVS TNDAASLMHL ARAGAGIAML
PTYLTAGLLQ AGELVRLFPE FEPQVVGMYA VYASRKHMPA TLRTMLDFLA RRFTGVPAWD
LPQAGPALSA NRRPAARRAP
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