| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2522 |
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| Symbol | fumC |
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| ID | 7969999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2663333 |
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| End bp | 2664730 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644793109 |
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| Product | fumarate hydratase |
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| Protein accession | YP_002944414 |
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| Protein GI | 239815504 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0114] Fumarase |
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| TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACTT CCCCCAAGAC CCGTGCCGAG CGCGATACCT TCGGACCGAT CGACGTGCCG
GCCGACAAGC TGTGGGGTGC GCAGACGCAG CGCTCGCTGC AGAACTTCGA CATCTCCGGC
GAGCAGCAGC CGCGCGAGAT CATCAAGGCG CTGGCGCAGG TCAAGCGCGC CTCGGCCGTG
GTCAACCACG CGCTGGGCCT GCAGGACGAG AAAAAAACCA AGGCCATCGT GGCCGCGGCC
GACGAGGTCA TTGCCGGCAA GCATCCGGGC GAGTTTCCGC TGGTGGTCTG GCAGACCGGC
TCGGGCACGC AGACCAACAT GAACGTCAAC GAGGTGCTGG CCAACCGCGC GAGCGAACTG
CTCGGCGGCG AGCGCGGGGA AGGGCGCCTC GTGCACCCGA ACGACGACGT GAACCGCAGC
CAGTCGAGCA ACGACGTGTT CCCCACCGCC ATGCACGTGG CGGCCGTCGA GGCCATCACG
CACAAGCTGC TGCCGGCCAT CGCCAGGCTG CGCAGCACGC TCGAGCAGAA GTCGAAGGAC
TTTGCCGACA TCGTGAAGAT CGGCCGCACC CACCTGCAGG ACGCCACGCC GCTCACGCTG
GGCCAGGAGT TCTCGGGCTA TGTGGCGCAG CTCGCGCATG GCGAGGCGCA TGTGCGCGCC
GCGCTGCCGC ACCTGTGCGA ACTGGCGCTG GGCGGCACGG CCGTCGGCAC CGGGCTCAAT
GCGCCCAAGG GCTATGCCGA GCAGGTGGCG GCCGAGCTGG CCAAGCTCAC GGGCCTGCCG
TTCGTGACCG CGCCCAACAA GTTCGAAGCC ATGGCCAGCG TCGATGCGCT GGTGCATGCC
CACGGCGCGC TCAAGACACT TGCCGCCAGC ATGAACAAGA TTGCCAACGA CGTGCGCTGG
CTCGCGAGCG GCCCGCGCAG CGGCATCGGC GAACTCAGCA TTCCAGAGAA CGAACCGGGC
TCTTCGATCA TGCCGGGCAA GGTCAACCCG ACACAGAGCG AAGCCGTCAC GATGCTGGCC
GCGCAGGTGT TCGGCAACGA CGTGGCCATC AACATCGGCG GCGCCTCGGG CAACTTCGAA
CTGAATGTGT TCCGCCCGAT GGTGGCGCAC AACTTCCTGC AGAGCGTGCG CCTGCTGGCC
GACGGCATGG TGAGCTTCAA CGACCACTGC GCCGTGGGCA TCGAGCCGAA CCGCGAACGC
ATCACCGAGC TGGTGCAGCG TTCGCTGATG CTGGTGACGG CGCTCAACAC GCACATCGGC
TACGACAAGT CGGCCTACAT CGCGAAGAAG GCGCACAAGG AAGGCACCAG CCTGCGCGAG
GCCGCGATTG CTTCGGGCCA CCTCACGGCC GAGCAGTTCG ACCAGTGGGT GGTGCCGGAG
AACATGACCG GCCGTTGA
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| Protein sequence | MTTSPKTRAE RDTFGPIDVP ADKLWGAQTQ RSLQNFDISG EQQPREIIKA LAQVKRASAV
VNHALGLQDE KKTKAIVAAA DEVIAGKHPG EFPLVVWQTG SGTQTNMNVN EVLANRASEL
LGGERGEGRL VHPNDDVNRS QSSNDVFPTA MHVAAVEAIT HKLLPAIARL RSTLEQKSKD
FADIVKIGRT HLQDATPLTL GQEFSGYVAQ LAHGEAHVRA ALPHLCELAL GGTAVGTGLN
APKGYAEQVA AELAKLTGLP FVTAPNKFEA MASVDALVHA HGALKTLAAS MNKIANDVRW
LASGPRSGIG ELSIPENEPG SSIMPGKVNP TQSEAVTMLA AQVFGNDVAI NIGGASGNFE
LNVFRPMVAH NFLQSVRLLA DGMVSFNDHC AVGIEPNRER ITELVQRSLM LVTALNTHIG
YDKSAYIAKK AHKEGTSLRE AAIASGHLTA EQFDQWVVPE NMTGR
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