| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2519 |
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| Symbol | proX |
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| ID | 7969996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2659361 |
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| End bp | 2660371 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644793106 |
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| Product | glycine betaine transporter periplasmic subunit |
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| Protein accession | YP_002944411 |
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| Protein GI | 239815501 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.395168 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAA GAACCCGTCT CATCCTTGCC CGCGGCCTGC TGGCCCTCGG TTTCGCCGCC
TTCGGCATGG GCGCACAGGC CGCCAATGAC CTGCCCGGCC AGGGCGTCAC CGTGCAGCCG
CTCAAGAGCT CGCTCGCCGA AGAGGCGTTC CAGACGCTGC TCGTGATGCG CGCGCTCGAG
AAGCTCGGCT ACACGGTGGA GCCCATGAAG GACCTCGAAC CCGCCACCGA GCACCTGGCC
ATCGCCAATG GCGACGCCAC CTTCATGGCC AACCACTGGA GCCTGCTGCA CGCCGACTTC
TACAAGAACA GCGGCGGCGA CGCCAAGCTG TGGCGCAAGG GCGTGTACTC GGACGGCGCG
GTGCAGGGCT ACCTGATCGA CCGCAAGACG GCCGAGCAGT ACAACATCCG CAGCATCGCG
CAGCTGAAAG ACCCGGCCAT CGCCAGGCTG TTCGATGCCG ACGGCGACGG CAAGGCCGAC
CTGACGGGCT GCAACCCCGG CTGGGGCTGC GAACTGGCGA TCGAGAACCA CCTGACGGCC
TACCAGCTGC GCGACACCGT CACGCACAAG CAGGGCAGCT ATGCCGCGCT GATGGCCGAC
ACCATCGCCC GCTTCAAGCA GGACAAGCCG GTGCTGTACT ACACCTGGAC GCCCTACTGG
GTCAGCGCGG TGCTGCGGCC CGGTGCGGAC GTGGTGTGGC TGCAGGTGCC CTTCTCGTCC
TCCCAGGGCG GCAACGCGGA CACGCAGCTT CCCAACGGCA AGAACTACGG CTTCCAGGCC
AACCAGGAGC AGATCGTCGC CAACCGGGCC TTCGTCGAGA AAAACCCGGC CGCCGGCCGG
CTGTTCGAGG TGATGAAACT GCCGATCGGC GACATCAACG CCCAGAACCT GCGCATGAGC
CAGGGCGCCA ACACGCAGCA AGACCTGGAG CGCCACACTG ACGGCTGGAT CCGGGCGCAC
CGGCCGCTGT TCGATGGCTG GATCGAGCAA GCCCGGGCCG CCGCAAGGTA G
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| Protein sequence | MKKRTRLILA RGLLALGFAA FGMGAQAAND LPGQGVTVQP LKSSLAEEAF QTLLVMRALE
KLGYTVEPMK DLEPATEHLA IANGDATFMA NHWSLLHADF YKNSGGDAKL WRKGVYSDGA
VQGYLIDRKT AEQYNIRSIA QLKDPAIARL FDADGDGKAD LTGCNPGWGC ELAIENHLTA
YQLRDTVTHK QGSYAALMAD TIARFKQDKP VLYYTWTPYW VSAVLRPGAD VVWLQVPFSS
SQGGNADTQL PNGKNYGFQA NQEQIVANRA FVEKNPAAGR LFEVMKLPIG DINAQNLRMS
QGANTQQDLE RHTDGWIRAH RPLFDGWIEQ ARAAAR
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