| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2515 |
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| Symbol | |
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| ID | 7969992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2654830 |
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| End bp | 2656131 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644793102 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002944407 |
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| Protein GI | 239815497 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2270] Permeases of the major facilitator superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCTGT TTCCGTCATC TGCCCTGAAC GCCGGCGTGC GCAAGCGCGA GGTGTTCGGC
TGGGCCATGT ACGACTTTGC GAATTCCGGC TACACCACGG TCGTCATCAC GGCCGTGTTT
GCCGCCTACT TCGTGGGCGG CATCGCCAAG GGGGCGCCGT GGGCCGCATT CGCCTGGACT
GCGGCGCTCA GCGCGTCCTA TGCCGTCGTC ATGCTTTCGA TGCCCGCGAT CGGCGCCTGG
GCCGACCGGC GTGCCGCCAA GAAGCGCGTG CTCGCCGTGG CGACGCTGGG CTGCGTACTT
GCCACGGCGG CGCTCGCATT CACGCCGAGG TTCTCGGGGG CCATGGGCGT TGCGGTTGCG
ATGGCGCTGA TCATCGTCTC CAACACCTTC TATTCCTACG GCGAGTCGCT GACCGGCGCC
TTCCTGCCTG AACTCGCGAC CGCCGAGGGC ATGGGCAAGG TCAGCGGATG GGGCTGGAGC
TTCGGCTACG TCGGCGGCAT GCTGGCGCTC GGGCTGTGCC TGGCCTACGT GCTGTCGGCC
CAGGCCAAAG GCCTGCCTGC ATCGCATTTC GTCCCGGTCA CGATGCTGAT CACCGCGGCC
ATCTACGGCG CAGCCGCCTG CGCCACCTTC GCGCTCCTGC CCGAGCGTGC GCAGCCCCGT
GCGGCCGGCA GCGCAGTGGG CGCATGGCAG CAATTGCGCG CCACCTTCGG GCAGGCCCGC
GCCTACCGCG ATTTCATGCA GCTGCTGGTC TGCACCGTCT GCTACCAGGG CGGCGTGGCA
GTGGCCATCA CGCTCGCCGC CATCTATGCC GAGCAGGTCA TCGGCTTCGT GGCGAGCGAG
ACCATGGTGC TGATCTTCGT GCTCAACATC GCGGCCGCTG TCGGCGCCTT CGGCTTCGGC
TACGTGCAGG ACCGCATCGG CCACAAGATC TCGCTGGCCG GCACGCTGGT GGCCTGGATC
GCGGTCTGCG TGATTGCCGC GATGGCGACC ACCAAGGGCA CCTTCTGGTG GGCCGCCGCC
ATTGCAGGGC TTGCGATGGG CTCGAGCCAG TCGGCCGGCC GCGCGATGAC GGGCTTCCTG
GCGCCGCCGC GGCAGCTTGC GGAGTTCTTC GGGCTCTGGA CCTTTGCCAC GCGGCTCGCG
GGCATCATCG GTCCGCTGAT GTTCGGCGCC ATCACCTGGG CCGCGGGCGG CAACCAGCGC
ATTGCGATTC TCTCGACCGC GGCGCTGTTC ATTGCGGGGC TGCTGCTGTT GCTGCCGATC
GACATGGCGC GCGGCAGGGC GGCCGCGCTG CGCGGCGCCT GA
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| Protein sequence | MALFPSSALN AGVRKREVFG WAMYDFANSG YTTVVITAVF AAYFVGGIAK GAPWAAFAWT
AALSASYAVV MLSMPAIGAW ADRRAAKKRV LAVATLGCVL ATAALAFTPR FSGAMGVAVA
MALIIVSNTF YSYGESLTGA FLPELATAEG MGKVSGWGWS FGYVGGMLAL GLCLAYVLSA
QAKGLPASHF VPVTMLITAA IYGAAACATF ALLPERAQPR AAGSAVGAWQ QLRATFGQAR
AYRDFMQLLV CTVCYQGGVA VAITLAAIYA EQVIGFVASE TMVLIFVLNI AAAVGAFGFG
YVQDRIGHKI SLAGTLVAWI AVCVIAAMAT TKGTFWWAAA IAGLAMGSSQ SAGRAMTGFL
APPRQLAEFF GLWTFATRLA GIIGPLMFGA ITWAAGGNQR IAILSTAALF IAGLLLLLPI
DMARGRAAAL RGA
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