| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2511 |
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| Symbol | clpP |
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| ID | 7969577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2649093 |
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| End bp | 2649701 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644793095 |
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| Product | ATP-dependent Clp protease proteolytic subunit |
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| Protein accession | YP_002944403 |
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| Protein GI | 239815493 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCAC AGGAAATCAA AGGCCTCGGC ATGATCCCGA TGGTCATCGA GCAGTCGGGC
CGCGGCGAGC GGTCCTACGA CATCTATTCG CGCCTCCTCA AGGAGCGCAT CATTTTCCTG
GTGGGCGAGG TGAACGACCA GACCGCCAAC CTCGTGGTGG CGCAGCTGCT GTTCCTCGAG
AGCGAGAACC CGGACAAGGA CATTTCGTTC TACATCAACT CCCCGGGCGG CAGCGTGAGC
GCCGGCATGG CCATCTACGA CACCATGCAG TTCATCAAGC CAGACGTTTC CACCATGTGC
ATCGGCTTTG CGGCCAGCAT GGGCGCCTTC CTGCTGGCGG CCGGAGAAAA GGGCAAGCGC
TTCTCGCTGC CCAATTCGAA GATCATGATC CACCAGGTGC TCGGCGGCGC GCGCGGCCAG
GCCACGGACA TCGAGATCCA CGCCCGCGAC ATCCTGCGCA CCAAGGACCA GATGAACCGC
ATCCTGGCCG AACGCACGGG CCAGCCGCTC GAAAAAGTCA AGTCGGACAC CGAACGCGAC
TATTTCCTCA CGGCCGACGA AGCCAAGGAC TACGGCCTGG TGGACCAGGT CATTGCGAAG
CGCAGCTGA
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| Protein sequence | MSAQEIKGLG MIPMVIEQSG RGERSYDIYS RLLKERIIFL VGEVNDQTAN LVVAQLLFLE
SENPDKDISF YINSPGGSVS AGMAIYDTMQ FIKPDVSTMC IGFAASMGAF LLAAGEKGKR
FSLPNSKIMI HQVLGGARGQ ATDIEIHARD ILRTKDQMNR ILAERTGQPL EKVKSDTERD
YFLTADEAKD YGLVDQVIAK RS
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