| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2510 |
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| Symbol | tig |
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| ID | 7969576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2647665 |
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| End bp | 2648978 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644793094 |
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| Product | trigger factor |
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| Protein accession | YP_002944402 |
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| Protein GI | 239815492 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
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| TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGTGA CCGTTGAAAC TCTCGAGAAG CTCGAACGCA AGATCACGCT GACCCTGCCG
GTCGGCACCA TCCAGTCCGA AGTCGATTCG CGCCTCAAGA AGCTCGCGCG CACCGTCAAG
ATGGATGGCT TCCGTCCCGG CAAGGTGCCC ATGAACGTCG TGGCCCAGCG CTACGGCTAC
TCGGTGCACT ACGAAGTCAT GAACGACAAG GTCGGCGAAG CCTTCTCGCA GGCCGCCAAC
GAAGCCAAGC TGCGCGTGGC CGGTCAGCCC CGCATCACCG AGAAGGAAGA GTCGCCCGAA
GGCCAGCTCG CCTTCGACGC GGTCTTCGAA GTGTTCCCCG AAGTCAAGAT CAACGACCTG
TCGAACGCCG AAGTCGAGAA GCTCTCGGCC GAAGTGGGCG AGGACGCCAT CGACAAGACG
CTGGACATCC TGCGCAAGCA GCGCCGCACC TTCGCGCAGC GCGCCCAGGA CGCCGTGGCC
CAGGACGACG ACCGCGTGAC GGTCGATTTC GAAGGCAAGA TCGACGGCGA GCCCTTCCCG
GGCGGCAAGG CCGAAGACTT CCAGTTCATC GTCGGCGAAG GCCAGATGCT CAAGGAATTC
GAAGACGCCG TGCGCGGCAT GAAGGCCGGC GACAGCCGCA CCTTCCCGCT CTCGTTCCCG
GCCGACTACC ACGGCAAGGA CGTGGCCGGC AAGCAGGCCG ACTTCATGGT CACCGTGAAG
AAGATCGAAG CCTCGCACCT GCCCGAAGTC AACGAACAGC TCGCCAAGTC GCTCGGCATT
GCCGAAGCCA CGGTCGAGGG CCTGCGCGCC GACATCAAGA AGAACCTCGA GCGCGAAGTG
AAGTTCCGCC TGCTGGCGCG CAACAAGAAC GCCGTGATGG ACACCCTGGT GGCCAACGCC
GAGCTCGACC TGCCCAACGC GAGCGTGCAG TCCGAAGTCA ACCGCATGGT CGAAGGCGCC
CGCGCCGAGC TCAAGCAGCG CGGCATCAAG GATGCCGACA AGGCACCGAT CCCCGACGAA
GTGTTCCGTC CCCAAGCAGA GCGCCGCGTG CGCCTGGGCC TCGTGGTGGC CGAGCTGGTG
CGCGCCAACA ACCTGCAGGC CAAGCCCGAG CAGATCAAGG CCCACATCGA CGAGCTGGCC
GCCAGCTACG AAAAGCCGGC CGACGTGGTG CGCTGGTACT TCAGCGACAA CAACCGCCTG
GCCGAAGTCG AAGCCGTGGT CATCGAGAAC AACGTGACCG ATTTCGTGCT CGGCAAGGCC
AAGGTCAAGG AAAAGTCGGT GTCGTTCGAC GAGCTGATGG CGCAACAAGG CTGA
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| Protein sequence | MTVTVETLEK LERKITLTLP VGTIQSEVDS RLKKLARTVK MDGFRPGKVP MNVVAQRYGY
SVHYEVMNDK VGEAFSQAAN EAKLRVAGQP RITEKEESPE GQLAFDAVFE VFPEVKINDL
SNAEVEKLSA EVGEDAIDKT LDILRKQRRT FAQRAQDAVA QDDDRVTVDF EGKIDGEPFP
GGKAEDFQFI VGEGQMLKEF EDAVRGMKAG DSRTFPLSFP ADYHGKDVAG KQADFMVTVK
KIEASHLPEV NEQLAKSLGI AEATVEGLRA DIKKNLEREV KFRLLARNKN AVMDTLVANA
ELDLPNASVQ SEVNRMVEGA RAELKQRGIK DADKAPIPDE VFRPQAERRV RLGLVVAELV
RANNLQAKPE QIKAHIDELA ASYEKPADVV RWYFSDNNRL AEVEAVVIEN NVTDFVLGKA
KVKEKSVSFD ELMAQQG
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