| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2509 |
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| Symbol | |
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| ID | 7969574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2644283 |
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| End bp | 2647438 |
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| Gene Length | 3156 bp |
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| Protein Length | 1051 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644793092 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_002944401 |
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| Protein GI | 239815491 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGAAG GCGCAGCAAC CACCGCCAAG CCCGCCGGCT TCAATCTTTC CAAATGGGCG
CTGGACCACG CGCCGCTCAC GCGCTACCTG ATGGTGGTGC TGATGGTGCT GGGCGCCTTC
GCGTACTTCC AGCTCGGCCA GGACGAAGAC CCGCCGTTCA CCTTCCGTGC CATGGTGGTT
CGCACCTTCT GGCCCGGCGC CACTGCCCAG CAGGTGGCCG AGCAGGTCAC CGACAAGCTC
GAGCGCACGC TGCAGGAGGC ACCGTACGCC GACAAGATCC GCAGCTATTC GAAGCCGGGC
GAGTCGCAGA TCATTTTCCA GATCAAGGAC TCGTCCAAGG CCGCCGACGT GGCCAATGTC
TGGTACACGG TGCGCAAGAA GGTCGGCGAC ATGCGCAACA CGCTGCCGCC GGGCGTGCAG
GGGCCGTTCT TCAATGACGA TTTCGGCGAC GTCTATGGCG TGATCTACGC GCTGGAGAGC
GAAGGCTTCA GCCAGGCCGA GCTCAAGACC CTGGCCGACG AGGTGCGCCA GCAGCTGCTG
CGCGTGAAGG ACGTGGCCAA GGTCGACCAG TTCGGCGTGC AGGACCAGAA GGTCTACATC
GAGATCTCCC AGAAGCGCGT CGCGCAGCTG GGGTTGGACT TCAACGCGGT GCTGGCCCAG
CTCGGCTCGC AGAACGCGAT CGAGAGCGCA GGCACGATCC AGTCGCCGCT CGACGTGGTG
CAGGTGCGCG TGGGCGGGCA GTTCACCAAC GTCGAGCAGC TGCGCGAGAT GCCGATCCGC
GGCAGCTCGG GCAACCAGCT CAGGCTCGGC GACATCGCCG AGATCCACCG CGGCTACATC
GATCCGCCGG CCGTGAAGGT GCACCACCAG GGCAAGGAAG TCGTCGCGCT CGGCGTTTCC
ATGGCCAAGG GCGGCGACAT CATCGCGCTG GGCAAGGCGC TGCGCGCCAC CACCGCGGAG
ATCGACCAGC GCCTGCCGGC CGGCGTGAAG CTCGCGCAGG TGCAGGACCA GCCGGTGTCG
GTGTCCAGCT CGGTCAACGA ATTCGTCGGC GTGCTGATCG AGGCGGTGGC GATCGTGCTG
GCCGTGAGCA TCATCTCGCT GGGCCTGCAC AAGGGCGGGC GATTCGGCTG GTACATCGAC
ATCCGGCCGG GGCTGGTGGT GGCCATCACG ATCCCGCTGG TGCTGGCCGT GACCTTCCTG
TCCATGAACT ATTTCGGCAT CGGGCTGCAC AAGATATCGC TGGGGTCGCT GATCATCGCG
CTCGGCCTCC TGGTGGACGA CGCGATCATC GCGGTCGAGA TGATGGTGCG GAAGATGGAG
GAGGGCTACG ACAAGGTGCG CGCCGCCACC TTCGCCTACG ACGTCACGGC CAAGCCCATG
CTGACCGGCA CGCTCATCAC GGCCGCGGGC TTCCTGCCGA TCGGCATCGC CAAGTCGGTC
ACGGGCGAAT ACACCTTCGC TATCTTCGCG GTAACGGTGA TCGCGCTGGT GCTGTCGTGG
ATCGTCTCGG TGTACTTCGT GCCCTACCTG GGCACGCTGC TGCTCAAGGT CAAGCCGCAC
GACCCCGATG CGCCGCCGCA CGAGCTGTTC GACACGCCGT TCTACAACAA CTTCCGCCGC
GCGGTGAACT GGTGCGTGCA GCACCGGTGG CTGACCATCG GTGCCACGGT GCTGATCTTC
GCGCTCGGCA TCTTCGGCAT GGGCAAGGTG CAGCAACAGT TCTTCCCGGA TTCGAGCCGG
CCGGAGATCA TGGTGGACAT CTGGTTCCCC GAAGGCACCT CGTTCGCGGC CAACGAAGAA
GTCGCCAAGC GCGTCGAGCA GCGCATCATG AAGGAAGAGG GCGTGAAGAC CGTCAGCACC
TGGATCGGCT CCGGCGTGCC GCGCTTCTAC CTGCCGCTGG ATCAGGTCTT TCCGCAGACC
AACGTCTCGC AGCTCATCGT GCTGGCCAAG GACCTGAAGG TGCGGGAGAC CCTGCGCATC
AAGCTGCCCG CGCTCTTGGC GCAGGAATTT CCCGAAGTGC GCGGCCGTGT GAAGCTGCTG
CCCAACGGGC CGCCGGTGCC GTATCCGGTG CAGTTCCGCG TGATCGGCAC CGACCCCGCC
CAGCTGCGCG CGCATGCCGA CGAGGTCAAG GCCGTGCTGC GCGAGAACGC CAACATGCGC
GGCGTGAACG ACAACTGGAA CGAATCGGTC AAGGTGATCC GCCTGGAGGT CGACCAGGCC
AAGGCGCGCG CGCTCGGCGT CACCAGCCAG GCGATCGCCC AGGCGTCCAA GACCATGTTC
TCCGGCACCA CCGTGGGCCA GTACCGCGAG AACGACCTGC TGATCGACAT CGTGCTGCGC
CAGTCGGCCG ACGAGCGCGA GGCCATCTCG GACATCGGCA ACGCCTACCT GCCCACCACC
TCGGGCCGTT CGATTCCGCT GACCCAGATC GCCCGGCCGG TGTTCAGCTG GGAACCCGGC
GTGATGTGGC GCGAGAACCG CGACTACGCC ATCACGGTGC AGGGCGACGT GGTCGAAGGC
CTGCAGGGCG CCACGGTGAC CGAGCAGCTG CTGCCGAAGC TGCGCCAGCT CGAGGCCGGC
TGGCACGCAG CCGGCGAGGG CGGCTACCGC ATCGAGGTGG CGGGCGCGGT CGAGGAAAGC
AGCAAGGGCT CGGCGTCCAT CGTGGCGGGC GTGCCGATCA TGCTGTTCCT GGTGTTCACG
CTCCTGATGC TGCAGCTGCA CAGCTTCAGC CGCTCGCTGC TGGTGTTCAT CACCGGCCCG
ATGGGCATCG CCGGCGTGGC CGGTGCGCTG CTGCTGCTGA ACCGTCCGTT CGGCTTCGTG
GCGCTGCTGG GCGTGATCGC GCTGATGGGC ATGATCCAGC GCAACGCGGT GATCCTGATC
GACCAGATCG AGAGCGACCG CGAGGCCGGC GTGCCGGCCT GGGATGCGAT CGTGGAATCG
GCCGTGCGGC GCCTGCGGCC GATCGTGCTG ACGGCGGCCG CGGCGGTGCT GGCGATGATT
CCGCTCTCCC GCAGCGTGTT CTGGGGGCCG ATGGCCGTGG CCATCATGGG CGGGCTGATC
GTGGCGACCG TATTGACCCT GCTGGCGCTG CCGGCAATGT ACGCCGCCGC CTTCCGCGTC
AAGCGGGAGC CGAAAGAGCT CCCGATTAGC GCTTAA
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| Protein sequence | MTEGAATTAK PAGFNLSKWA LDHAPLTRYL MVVLMVLGAF AYFQLGQDED PPFTFRAMVV
RTFWPGATAQ QVAEQVTDKL ERTLQEAPYA DKIRSYSKPG ESQIIFQIKD SSKAADVANV
WYTVRKKVGD MRNTLPPGVQ GPFFNDDFGD VYGVIYALES EGFSQAELKT LADEVRQQLL
RVKDVAKVDQ FGVQDQKVYI EISQKRVAQL GLDFNAVLAQ LGSQNAIESA GTIQSPLDVV
QVRVGGQFTN VEQLREMPIR GSSGNQLRLG DIAEIHRGYI DPPAVKVHHQ GKEVVALGVS
MAKGGDIIAL GKALRATTAE IDQRLPAGVK LAQVQDQPVS VSSSVNEFVG VLIEAVAIVL
AVSIISLGLH KGGRFGWYID IRPGLVVAIT IPLVLAVTFL SMNYFGIGLH KISLGSLIIA
LGLLVDDAII AVEMMVRKME EGYDKVRAAT FAYDVTAKPM LTGTLITAAG FLPIGIAKSV
TGEYTFAIFA VTVIALVLSW IVSVYFVPYL GTLLLKVKPH DPDAPPHELF DTPFYNNFRR
AVNWCVQHRW LTIGATVLIF ALGIFGMGKV QQQFFPDSSR PEIMVDIWFP EGTSFAANEE
VAKRVEQRIM KEEGVKTVST WIGSGVPRFY LPLDQVFPQT NVSQLIVLAK DLKVRETLRI
KLPALLAQEF PEVRGRVKLL PNGPPVPYPV QFRVIGTDPA QLRAHADEVK AVLRENANMR
GVNDNWNESV KVIRLEVDQA KARALGVTSQ AIAQASKTMF SGTTVGQYRE NDLLIDIVLR
QSADEREAIS DIGNAYLPTT SGRSIPLTQI ARPVFSWEPG VMWRENRDYA ITVQGDVVEG
LQGATVTEQL LPKLRQLEAG WHAAGEGGYR IEVAGAVEES SKGSASIVAG VPIMLFLVFT
LLMLQLHSFS RSLLVFITGP MGIAGVAGAL LLLNRPFGFV ALLGVIALMG MIQRNAVILI
DQIESDREAG VPAWDAIVES AVRRLRPIVL TAAAAVLAMI PLSRSVFWGP MAVAIMGGLI
VATVLTLLAL PAMYAAAFRV KREPKELPIS A
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