| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2493 |
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| Symbol | |
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| ID | 7969558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2633880 |
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| End bp | 2634380 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644793076 |
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| Product | glycoside hydrolase family 24 |
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| Protein accession | YP_002944385 |
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| Protein GI | 239815475 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3772] Phage-related lysozyme (muraminidase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGCAG CCAACCTGAA GACCTCGGCC GAGGGCCACA CCATCATGCA TTACTTCGAG
CAGTGCCGGC TCGAGGCGTA TCCAGATCCT GGCACCGGTG GGGCGCCGTG GACGATCGGA
TGGGGCGACA CCGGGCCCGA TGTGGTGCCT GGGCTCGTCA TCACCCAGGA AGAGGCCGAC
CAGCGCTATG CGAATCGCCT GCACCGGGAA TTCGAGCCTG GCGTGGTCGA CCTGCTGCAG
CGCGAGCCGA CACAAGCCCA GTTCGATGCC CTCGTCTCGC TGGCATACAA TATCGGGCTT
GCCAACTTCC GGGGCTCAAC GGTCCTGCGC AAGTTCAATC AGGGCGACGA CATCGGCGCG
GCCGACGCGA TCCTGATGTG GAACAAGGCA GGCGGCAAGG TCATGCTCGG CCTGAAGCGG
CGCCGGACCG CGGAGCGCGC GCGGTTCCTC GGCGCCAGTG GCAAGCAAGC AACCGCCGTC
GGCGCCGCGG TGTCGTCATG A
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| Protein sequence | MDAANLKTSA EGHTIMHYFE QCRLEAYPDP GTGGAPWTIG WGDTGPDVVP GLVITQEEAD
QRYANRLHRE FEPGVVDLLQ REPTQAQFDA LVSLAYNIGL ANFRGSTVLR KFNQGDDIGA
ADAILMWNKA GGKVMLGLKR RRTAERARFL GASGKQATAV GAAVSS
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