| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2490 |
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| Symbol | |
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| ID | 7969555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2630943 |
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| End bp | 2633180 |
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| Gene Length | 2238 bp |
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| Protein Length | 745 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644793073 |
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| Product | hypothetical protein |
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| Protein accession | YP_002944382 |
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| Protein GI | 239815472 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCAC TCCAGAACCT CACTGCAAAC ACCAACGTCT TCCAGCAGCT CAATGAGAAC
TTCGATGCTG CATCGCCGGC CGGGATGTAC GGCAAGCGCG CGCCTGCAAC ATCGGGGTTG
ACCTGGGCCT ACTACGGCGG CCGTGGCTTC GGAAATGCCA TTGCCGATGG CACGGTGGCG
CTCACGGGCA GCGCGACGAA CTATGTGGTT GCCAACCGCT CGACGGGTGC GGTCAGCGTC
TCGACCAGCA TCGCCAACTG GAATGACGCC GCCAACTACT ATCGTCTCTA TTTGATCGTC
GCTGGGGCTT CGACGATCAC TTCGGCCGCA GACCATCGTG AGTTCGTGGG TGCTAGCTCG
ATTGCGACGG ACAACGACAC AACGCTTGCT GGTGATAGCA GTGTCAATGT CCCGACGCAG
CACGCGGTAA AGACCTACGT CGACAACCTC GTACAAGGTC TCAGCTGGAA GAAATCTGTC
CGCGTAGCAA CCACGGCGAA CGGCGTCCTC GCATCAGCAT TTGCAAACGG GCAGGTCATC
GATGGGGCGA CACTTGCGAC GGGTGATCGA ATTCTTATCA AGAGCCAGAC GACGGGCTCG
GAGAACGGCA TCTACGTTGT GAATGCAAGC GGAGCACCCA CTCGTGCAAT GGATGCCGAC
ACTGGCGTCG AGATGGTGAA TGCTACTGTC ATGGTGCAGG ATGGGTCGAC GCAAGCCGAC
ACGCAGTGGA CATGCTCGAC GAATGCCCCG ATCACGATCG GAAGCACCTC ACTTTCCTTC
TCGCAATTGA GTGCGGGTGG TGGGGGCGTC ACAAGTGTAG ATGCATCGGG CGGCGTAGAA
ACTACCAGCG GGTCGGCAAT TACCTCGACA GGGACAATCC GAGCCTCGAC ACTGGTGAAT
CCGCAGACCG GCACTACGTA CACCTATGTG TCAGGAGACC GAGGAAAACT CGTTACGCAT
AGCAACGCTG CTTCTATCTC TGGCACTTTG CCGCAGGCCA CGTCGGCCTT CGGCTCTGGC
TGGTTCATGA GGGTGAAGAA CAAGGGCGCC GGCACGCTGA CGATTACGCC AACGACTTCC
ACCATTGACG GTGGGGCGAC GCTCGTACTG ACGACCGGCC AATGGGCGGT GATCGTCTCT
GATGGCACGA ACTATCAGGC CTACGTGTAT GCGCCGGCAG GGGGCGCAGG CCTGACGAAT
TTCACCGAAT CGGTCAACAC TGCCACCCCC AACGCGACGG TCCCGGTCGT GCGCCTGATC
GCGACGAATG CGGCAACCGA CGTGGACATT GCCCTCACGC CCAAGGGCGC GGGCACTCTG
GCGGCACAGA TCGCCGACAA CACCACGGCG GGGGGGAACA AACGAGGGGG GAGTTCAGTC
GACTGGCAGA TGGGCAGGGC GGCGGCTGCC AATGTTGCAT CCGGTGCATC GTCGACGATC
TCTGGCGGCA ATGACAACAA GGCGACGGGC ACCTATTCGA CTGTGACTGG TGGCCACACG
AACTTCGCCA CCGCAACGGC GGCGACAGTC GCCGGCGGCG ACACCAACAC GGCCAGTGCG
AACAATTCCT TCGTCGGGGG CGGTACAAGC AACACCGCAT CGACCGCGCA GGCCGCCGTC
GTTGGGGGGA CGACCAACAC GGCAAGTCAG ACAAATGCAT TTGTCGGCGG GGGCAGTACG
AATACGTCCA GCGGCTCGAA TGCAGGCATC GTCGCCGGAC TGAACAACAC CGCTGCCGGC
ACCGGATCAT TCATCGCAGG CAGCAATCGA GCAACGACGC GTGGGTTGGA CTATTGCCAT
GCCCATGCCG CCGGGCGCTT TGCTGTTGAT GGCGACGCGC AGTCCTGTCG CTTCATCCAG
CGTAGGTCAA CCGCCAATGC CACCGCGACC GCTTTGTCTG CGGACGGTTC GGCGCCGTCT
GCAACTTCTT CCATTGTTCT GCCGGATTCG TCGGTCTACC ACTTCATCGC TCGGATCACG
GCTCGCAACA ACTCCAACGG TGATGCGGCG GTCTTTGAGA TTCGCGGGGC AATCAAGCGC
GCTTCTGGGG TGGCCACCAC GGCTCTTCTG GGAACGCCAG CAGTGACTAC GGTCGGCGCA
GACGCGGGAG CCTCGGGCTG GTCTGTCGCT GCAGTCGCCA ACACAACCCT GGGCAGTCTC
GAGATCCAGG CGACGGGCGC CGCGTCCACG ACCATCAAAT GGGTGGCCAG TGTCTGGACG
GTGGAGGTTG TCGGTTGA
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| Protein sequence | MTALQNLTAN TNVFQQLNEN FDAASPAGMY GKRAPATSGL TWAYYGGRGF GNAIADGTVA
LTGSATNYVV ANRSTGAVSV STSIANWNDA ANYYRLYLIV AGASTITSAA DHREFVGASS
IATDNDTTLA GDSSVNVPTQ HAVKTYVDNL VQGLSWKKSV RVATTANGVL ASAFANGQVI
DGATLATGDR ILIKSQTTGS ENGIYVVNAS GAPTRAMDAD TGVEMVNATV MVQDGSTQAD
TQWTCSTNAP ITIGSTSLSF SQLSAGGGGV TSVDASGGVE TTSGSAITST GTIRASTLVN
PQTGTTYTYV SGDRGKLVTH SNAASISGTL PQATSAFGSG WFMRVKNKGA GTLTITPTTS
TIDGGATLVL TTGQWAVIVS DGTNYQAYVY APAGGAGLTN FTESVNTATP NATVPVVRLI
ATNAATDVDI ALTPKGAGTL AAQIADNTTA GGNKRGGSSV DWQMGRAAAA NVASGASSTI
SGGNDNKATG TYSTVTGGHT NFATATAATV AGGDTNTASA NNSFVGGGTS NTASTAQAAV
VGGTTNTASQ TNAFVGGGST NTSSGSNAGI VAGLNNTAAG TGSFIAGSNR ATTRGLDYCH
AHAAGRFAVD GDAQSCRFIQ RRSTANATAT ALSADGSAPS ATSSIVLPDS SVYHFIARIT
ARNNSNGDAA VFEIRGAIKR ASGVATTALL GTPAVTTVGA DAGASGWSVA AVANTTLGSL
EIQATGAAST TIKWVASVWT VEVVG
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