| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2471 |
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| Symbol | |
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| ID | 7969536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2613111 |
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| End bp | 2614763 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644793054 |
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| Product | Terminase |
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| Protein accession | YP_002944363 |
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| Protein GI | 239815453 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4626] Phage terminase-like protein, large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTAGAGG GCAAGCGCAT CGCCGGCCCT CATGTTCGCG ATACCTGCGC GCGGCACCTG
AAGGATCTGG CGGAGGGTAA GAAGCGCGGT CTGGTCTGGA ACTTGGAAGA GGCGAACAAG
GCCATCCGGT TTTTCGAGTG TGTGCTGAAG TTGAATGGCG GCGACTACGA GGGTAAGCCG
TTCATTCTGT TGGCTTGGCA GAAGTTCGTT GTCGGCTCGA CGTTCGGCTG GTTCGGCGCC
GACGGCTACC GTCGTTTTCG GGTCTGCTAT GTGGAGACGG CGAAGGGTTC GGGGAAGTCG
CCGCTGGCGG CCGGCATCGG GATGAAGGGG TTCGTTGCCG ACGGCGAGGC ACGGGCAGAG
GTGTACAGCG CCGCCACGAA AAAGGATCAG GCAATGATCC TCTTCCGTGA CGCCGTTGCG
ATGGTCGATC AGTCTCCGGA GCTTTCGAAG CGACTGCAGA AGAGCGGCAC CGGCGAGAAG
TGCTGGAATC TGGCTTATCT GCAGGCGGGC GCGTTCTTCC GGCCAATCAG CAGCGATGAC
GGGCAATCCG GCCCGCGGCC TCACATCGGG TTGATCGACG AGTTGCACGA GCACAAGACG
AACACCGTTG TCGAAATGCT GCGCGCGGGC ACGAAGAGCC GGCGCCAGGC GCTGATCTTC
ATGATCACGA ACAGCGGTTC AAACAAGCAC GGGCCGTGCT GGGGGTATCA CGAGTACGGG
GCCAAGGTTG CGGCTGGCGA GCGGCAAGAC GACGCATTCT TCAGTTTCAT TTGCGCGCTC
GACGAGGACG ACGACCCATT TGAGGATGAG AAGTGCTGGC CGAAGGCGAA TCCCAGCCTT
CAGGACGCCG ATCTGCCGGG CTACAAGTAC ATCCGGGAGC AAGTCACCGA AGCTAAGGGG
ATGCCGGGCA AGGAAGCGCT GGTGCGACGG CTCAACTTCT GCCAGTGGAC AGGCGCTGAG
TCGCCGTGGC TGAGCCATGA AATCTGGAAG GGCGCGCAGC GCGACTTCGA CTGGCAGGAC
TTGCGCGGCC GGCGCGCGGT GGCTGGGCTC GATCTCTCGA GCACGACCGA CCTGACCGGC
CTGGTGTTCT TCGTGGAGCC TGTCGAAGAG GGCGAACCCT GGAAGATTGT TCCGTTCGGT
TGGCTGCCTG AAATTGGGCT GCAGGAAAAG AACGACACCG ACGGCGTGCC CTATGTGCAG
TGGAAGGCCG AAGGGTATCT GGATACAACG CCTGGGCGTG CGATCAGCAA GCGGACGATT
CTCCAGAAGC TGAGCGGCAT GTGCGACTTC TTCGAGGTCG TTGAGGTGGC CTACGACCGC
TGGCGGATCG AGGATTTGAT CGCGCTGGCG AACGACGAAG GCATCACGCT TCCGCCGATG
CGCCCCTTCG GGCAGGGCTT CAAGGACATG AGTCCGGCTG TCGAGAACTT CGAACGCATG
CTGTTGAACG GCGAGCTCGT GCACGCTGGC CACAAGTTGC TGACGATGTG CGCAGGGAAT
GCAGTGATCG AACAGGACGG CGCGGAGAAC CGCAAGCTGT CGAAAGAAAA AGCGACCGGC
CGAATTGACC TGATGGTCGC GGCTGTCATG GCAGGCGGCC TGGTGGCCAC CCTGCCAGAA
CCCCTAGCGG AACCGCAAAT ACGATGGCTT TGA
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| Protein sequence | MVEGKRIAGP HVRDTCARHL KDLAEGKKRG LVWNLEEANK AIRFFECVLK LNGGDYEGKP
FILLAWQKFV VGSTFGWFGA DGYRRFRVCY VETAKGSGKS PLAAGIGMKG FVADGEARAE
VYSAATKKDQ AMILFRDAVA MVDQSPELSK RLQKSGTGEK CWNLAYLQAG AFFRPISSDD
GQSGPRPHIG LIDELHEHKT NTVVEMLRAG TKSRRQALIF MITNSGSNKH GPCWGYHEYG
AKVAAGERQD DAFFSFICAL DEDDDPFEDE KCWPKANPSL QDADLPGYKY IREQVTEAKG
MPGKEALVRR LNFCQWTGAE SPWLSHEIWK GAQRDFDWQD LRGRRAVAGL DLSSTTDLTG
LVFFVEPVEE GEPWKIVPFG WLPEIGLQEK NDTDGVPYVQ WKAEGYLDTT PGRAISKRTI
LQKLSGMCDF FEVVEVAYDR WRIEDLIALA NDEGITLPPM RPFGQGFKDM SPAVENFERM
LLNGELVHAG HKLLTMCAGN AVIEQDGAEN RKLSKEKATG RIDLMVAAVM AGGLVATLPE
PLAEPQIRWL
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