| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2452 |
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| Symbol | |
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| ID | 7969516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2603697 |
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| End bp | 2603942 |
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| Gene Length | 246 bp |
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| Protein Length | 81 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644793034 |
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| Product | hypothetical protein |
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| Protein accession | YP_002944344 |
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| Protein GI | 239815434 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000933973 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAAAAG TCTTGGCGAA CCGGAAGGTG CTGAAGTTGG CAGGAAACAG CCACGCGGAA
GTGGCGCGAA TCCTTGGATA TGAGGACCGG CGCAACGTCT GGCCCTGGAC CAACGGCCTC
AACCCCTTCC CGCCGTATCA CTGCCGAACC CTCGAAGACC ACTTCAAGGG CCAGATCACG
CGCAAAGAGC TTCGCCCGCA CGACTGGCAG AAGCACTGGC CCGACCTCGC AATCGTGGCC
GCCTGA
|
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| Protein sequence | MQKVLANRKV LKLAGNSHAE VARILGYEDR RNVWPWTNGL NPFPPYHCRT LEDHFKGQIT
RKELRPHDWQ KHWPDLAIVA A
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