| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2431 |
|---|
| Symbol | |
|---|
| ID | 7970475 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | - |
|---|
| Start bp | 2592713 |
|---|
| End bp | 2593501 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644793013 |
|---|
| Product | putative phage-related protein |
|---|
| Protein accession | YP_002944323 |
|---|
| Protein GI | 239815413 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0708061 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCCGT TCAAGATCGA CGGCCCGACC TGTCTCAGCT TTTCGGCTGG CCGCAGCAGC
GCATACATGC TGTGGCGCAC GCTTCAAAGC AACGACCTGG CCACTGTTGG CAGGTGGCTG
AAGGTTCTGT TTTGCAACAC CGGCAAAGAG GAAGAGGCAA GTCTTCGTTT CTGGCGTGAT
TGCTCGGATC GGTGGAGCAA AAGCGCCAAC CGCAACGGCA AGCCGTTCAA GACCATCATC
GAACAGCGTG GCGGCGTCCT CCCGAATCGC GTGGCGCGTT ATTGCTCTTC CGAAATGAAG
ACGCGGACCA TGCATCGATA CCTCCGTGAC CTCGGCTGGA AAGAGTGGGA TTCCTTCATT
GGTATCCGCG CCGATGAGCC TCTGCGCGTC TCGAAGAACC GCGCGAACCC CTTTCCCGAA
TCGAAGGATG AAGAGGTGCA TATGCCTCTC GCAATTGCTG GAATCTCCGC AAAGGACGTT
GGTGCGTTCT GGCGCTCACA TCCATTCGAC CTCGGCCTAC CGAACCACAA CGGCAAGACG
GCGCACGGCA ACTGTGATCT GTGCTTCCTC AAGCCAGCCG CGCAAGTCCT GTCTCTGATC
CAAGAAAAGC CAACGCGCGC TGTCTGGTGG GCCGATCAAG AAAAGAAGGC CGAAAAGGTA
GCGACTGGCA GCGGCAGCCG CTTTCGCGAC GACCGTCCCA GTTATGCCCA GATGGCTCAA
TTCACAAAGG ATCAATCCGA TGCCTTCGAC ATCAACGAAG AAGCCGCTTC GTGCATCTGT
GGAGACTGA
|
|---|
| Protein sequence | MDPFKIDGPT CLSFSAGRSS AYMLWRTLQS NDLATVGRWL KVLFCNTGKE EEASLRFWRD
CSDRWSKSAN RNGKPFKTII EQRGGVLPNR VARYCSSEMK TRTMHRYLRD LGWKEWDSFI
GIRADEPLRV SKNRANPFPE SKDEEVHMPL AIAGISAKDV GAFWRSHPFD LGLPNHNGKT
AHGNCDLCFL KPAAQVLSLI QEKPTRAVWW ADQEKKAEKV ATGSGSRFRD DRPSYAQMAQ
FTKDQSDAFD INEEAASCIC GD
|
|---|
| |